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Evaluation of Germplasm Using SSR Markers of Functional Genes in Rice

ZHAO Yong YANG Kai Akbar Ali Cheema WENG Yue-jin

中国农业科学(英文版)2002,Vol.1Issue(5):477-480,4.
中国农业科学(英文版)2002,Vol.1Issue(5):477-480,4.

Evaluation of Germplasm Using SSR Markers of Functional Genes in Rice

Evaluation of Germplasm Using SSR Markers of Functional Genes in Rice

ZHAO Yong 1YANG Kai 1Akbar Ali Cheema 2WENG Yue-jin1

作者信息

  • 1. Institute of Crop Germplasm Resources, Chinese Academy of Agricultural Sciences, Beijing 100081, P.R. China
  • 2. Nuclear Institute for Agriculture and Biology, Faisalabad, P. O. Box 128, Pakistan
  • 折叠

摘要

Abstract

16 SSR (Simple sequence repeats) primers of functional genes in rice were used to detect genetic diversity among 23 accessions of rice germplasm from 5 countries in the world. The average number of alleles per SSR locus was 5.2 with a range from 2 to 10. Genetic similarities among the 23 rice accessions ranged from 0.13 to 0.64. UPGMA cluster analysis showed that the 23 rice accessions could be classified into two distinct classes at similarities with a coefficient of 0.13. The Japonicas from Brazil, Japan and China were classified into Class I, along with upland rice from Brazil. The Indicas from Pakistan and Korea were classified into Class Ⅱ. Consequently, the function of genes SSR markers could be used as a useful tool for measuring genetic diversity, assigning rice to geographical distribution, ecotype, and pedigree relationship.

关键词

Rice/SSR/Cluster analysis

Key words

Rice/SSR/Cluster analysis

引用本文复制引用

ZHAO Yong,YANG Kai,Akbar Ali Cheema,WENG Yue-jin..Evaluation of Germplasm Using SSR Markers of Functional Genes in Rice[J].中国农业科学(英文版),2002,1(5):477-480,4.

中国农业科学(英文版)

2095-3119

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