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牙鲆CA/GT微卫星标记的筛选

常玉梅 孙效文 李绍武 赵莹莹 朱晓琛 刘海金

动物学研究2005,Vol.26Issue(6):652-656,5.
动物学研究2005,Vol.26Issue(6):652-656,5.

牙鲆CA/GT微卫星标记的筛选

Isolation of CA/GT Microsatellites from the Paralichthys olivaceus Genome

常玉梅 1孙效文 2李绍武 1赵莹莹 1朱晓琛 3刘海金1

作者信息

  • 1. 中国水产科学研究院,黑龙江水产研究所,黑龙江,哈尔滨,150070
  • 2. 中山大学,生命科学学院,广东,广州,510275
  • 3. 上海水产大学,生命科学学院,上海,200090
  • 折叠

摘要

Abstract

A library rich in CA/GT microsatellites was constructed from the Paralichthys olivaceus genome by combining biotin capture method and radioactive labeling hybridization. Five hundred and twenty six positive clones were obtained through twice screens. Sequencing confirmed 133 microsatellite loci (number of repeats≥5) in 119 positive clones. Of these microsatellites, two (1.5%) had compound repeat motifs, 63 (47.37%) had perfect motifs and 68 (51.13%) had imperfect motifs. Primer pairs were designed in the flanking regions of 22 microsatelites and subjected to PCR amplification. In 8 artificial gynogenesis families, four pairs failed to amplification, one pair was monomorphic, and the rest were polymorphic with an average of 5.2 alleles per locus. Heterozygosities ranged between 0.375 and 0.846, PIC ranged between 0.305 and 0.823. The results suggested that most of the microsatellites we isolated were qualified to be applied to the population genetic studies of P. olivaceus.

关键词

牙鲆/微卫星标记/生物素选择杂交法/同位素标记杂交法

Key words

Paralichthys olivaceus/Microsatellite/Biotin capture/Radioactive labeling

分类

生物科学

引用本文复制引用

常玉梅,孙效文,李绍武,赵莹莹,朱晓琛,刘海金..牙鲆CA/GT微卫星标记的筛选[J].动物学研究,2005,26(6):652-656,5.

基金项目

国家 "973" 计划(2004CB117405) (2004CB117405)

动物学研究

OA北大核心CSCD

0254-5853

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