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Single nucleotide polymorphisms of the SCN5A gene in Han Chinese and their relation with Brugada syndrome

陈君柱 谢旭东 王兴祥 陶明 尚云鹏 郭晓钢

中华医学杂志(英文版)2004,Vol.117Issue(5):652-656,5.
中华医学杂志(英文版)2004,Vol.117Issue(5):652-656,5.

Single nucleotide polymorphisms of the SCN5A gene in Han Chinese and their relation with Brugada syndrome

Single nucleotide polymorphisms of the SCN5A gene in Han Chinese and their relation with Brugada syndrome

陈君柱 1谢旭东 1王兴祥 1陶明 2尚云鹏 1郭晓钢1

作者信息

  • 1. Department of Cardiovascular Diseases, First Affiliated Hospital, Medical School of Zhejiang University, Hangzhou 310003, China
  • 2. Genomics & Bioinformatics Center, Chinese Academy of Science, Beijing 101300, China
  • 折叠

摘要

Abstract

Background Mutations in the cardiac sodium channel gene (SCN5A) may lead to a broad spectrum of familial arrhythmias, including long QT syndrome (LQTS), idiopathic ventricular fibrillation (IVF), and isolated cardiac conduction diseases. Recent studies have shown that polymorphisms in the SCN5A gene also play an important role in the manifestation of disorders involving cardiac excitability. In this study, we investigated the polymorphisms of the SCN5A gene in Han Chinese and its relation to Brugada syndrome (BS).Methods Genomic DNA was isolated from 120 unrelated healthy volunteers and 48 unrelated Brugada syndrome patients by means of standard procedures. All exons including the putative splicing sites of the SCN5A gene were amplified by PCR and sequenced directly or after subcloning using an ABI Prism 377 DNA sequencer. Results A total of 5 single nucleotide polymorphisms (SNPs) were identified in the Han Chinese population, including 3 novel ones: G87A(A29A), 4245+82A>G, and G6174A. The allele frequencies of each SNP in the Han Chinese population were as follows: G87A (A29A) 27.5%, A1673G (H558R) 10.4%, 4245+82A>G 32.8%, C5457T (D1819D) 41.3%, and G6174A 44.9%. S1102Y and 10 other SNPs identified in other ethnic populations were not detected in this study. There was no significant difference in the allele frequency of A1673G (H558R) between different ethnic populations (all P>0.5). On the other hand, the allele frequency of C5457T (D1819D) among Han Chinese was similar to its frequency among Japanese (P>0.5), but higher than that among Americans (P<0.005). The allele G1673 (R558) was over-represented in BS patients compared to controls (P<0.005), but there was no significant difference in genotype frequencies at this locus. There were also no differences in either the allele or genotype frequencies of the 4 other identified SNPs when comparing BS patients with healthy controls. Conclusions The distribution of SCN5A SNPs may vary between different ethnicities. The polymorphism of A1673G might be associated with BS and may contribute to a susceptibility to BS in Han Chinese.

关键词

polymorphism, genetics/SCN5A gene/Brugada syndrome/arrhythmia

Key words

polymorphism, genetics/SCN5A gene/Brugada syndrome/arrhythmia

分类

医药卫生

引用本文复制引用

陈君柱,谢旭东,王兴祥,陶明,尚云鹏,郭晓钢..Single nucleotide polymorphisms of the SCN5A gene in Han Chinese and their relation with Brugada syndrome[J].中华医学杂志(英文版),2004,117(5):652-656,5.

基金项目

This study was supported by a grant from the Foundation for Science and Technology Research of Zhejiang Province (No. 021107613). (No. 021107613)

中华医学杂志(英文版)

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