安徽农业大学学报2011，Vol.38Issue(1)：6-13,8.DOI:CNKI:34-1162/S.20110107.1521.021
水稻新型潜在冷调节蛋白的生物信息学预测与分析
Prediction and analysis for new potential rice cold regulated proteins based on bioinformatic method
摘要
Abstract
Cold regulated protein is a kind of protein associated with cold resistant ability of plants. There are many types of cold regulated proteins in plant. However, very few cold regulated proteins from rice have been found recently. We have predicted 16 new potential cold regulated proteins in rice by bioinformatics methods as well as using the cold regulated proteins which have been found as probes. And then the structural domains, secondary structures, tertiary structures and amino acid compositions of these above proteins have also been predicted using these online programs, such as NCBI-conserved domains, SWISS-MODEL and ExPASY ProtParam tool. The bioinformatical analysis results show that the 16 new potential rice cold regulated proteins and other cold regulated proteins have the same basic structural characteristics and structural domains, implying that the 16 new proteins might belong to rice cold regulated protein family.关键词
冷害/冷调节蛋白/生物信息学/水稻Key words
chilling injury/ cold regulated protein/ bioinformatics/ rice分类
生物科学引用本文复制引用
王鹏飞,任相亮,陈曦,王荣富,马飞..水稻新型潜在冷调节蛋白的生物信息学预测与分析[J].安徽农业大学学报,2011,38(1):6-13,8.基金项目
国家转基因作物新品种培育重大专项(2009ZX08009-063B)和安徽省教育厅自然科学基金重大项目(KJ2010ZD04)共同资助. （2009ZX08009-063B）
