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实时荧光PCR技术在丙型肝炎病毒基因型检测中的应用

袁小珍 陈伟烈 魏绍静 唐漾波

广东医学2011,Vol.32Issue(5):582-584,3.
广东医学2011,Vol.32Issue(5):582-584,3.

实时荧光PCR技术在丙型肝炎病毒基因型检测中的应用

Application of real - time fluorescent PCR in the detection of HCV genotypes.

袁小珍 1陈伟烈 1魏绍静 1唐漾波1

作者信息

  • 1. 广东省广州市第八人民医院传染病研究所,510060
  • 折叠

摘要

Abstract

Objective To study the application of real - time fluorescent PCR in the detection of Hepatitis C Virus ( HCV ) genotypes. Methods Real - time fluorescent PCR with one step reverse transcription ( RT ) combining with TaqMan was performed to detect the HCV genotypes. And sequencing of NS5B gene was applied for comparison. Results Real -time fluorescent PCR genotyping was successfully performed in 110 of 119 cases of HCV, with 71 and 48 cases were genotype - 1 and non - genotype - 1, respectively. Genotype - 1 and non - genotype - 1 were revealed in 73 cases ( 66.4%, all were subtype lb ) and 37 cases ( 33.6%, 7 cases were 2a, 6 cases were 3a, 3 cases were 3b, 1 case was 4a, 1 case was 4k, 1 case was 5a, 17 cases were 6a and 1 case was 6n ), respectively. The total coincidence rates of genotype - 1 and non - genotype - 1 were 71.8% ( 79/110 and 80. 9% ( 55/68 ), respectively. Conclusion Real - time fluorescent PCR is rapid and simple test for HCV genotyping, though without high specificity.

关键词

实时荧光PCR/基因测序/丙型肝炎病毒/基因型

Key words

real -time fluorescent PCR/ sequencing/ hepatitis C virus/ genotype

引用本文复制引用

袁小珍,陈伟烈,魏绍静,唐漾波..实时荧光PCR技术在丙型肝炎病毒基因型检测中的应用[J].广东医学,2011,32(5):582-584,3.

基金项目

广东省医学科研基金资助项目(编号:A2009550),广州市医药卫生科技重点项目(编号:2007-ZDi-03) (编号:A2009550)

广东医学

OA北大核心CSCDCSTPCD

1001-9448

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