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猪H-FABP基因第2内含子SNPs分布及连锁不平衡遗传模式研究

王立刚 张龙超 赵克斌 颜华 王立贤

中国畜牧兽医2011,Vol.38Issue(1):122-125,4.
中国畜牧兽医2011,Vol.38Issue(1):122-125,4.

猪H-FABP基因第2内含子SNPs分布及连锁不平衡遗传模式研究

Nucleotide Variability and Linkage Disequilibrium Patterns at the Porcine H-FABP Gene

王立刚 1张龙超 1赵克斌 1颜华 1王立贤1

作者信息

  • 1. 中国农业科学院北京畜牧兽医研究所,北京,100193
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摘要

Abstract

DNA resequencing of the H-FABP gene intron 2 in 16 pigs from 9 breeds which were Zang pig, Exi pig,Large White pig, Laiwu Black pig, Beijing Black pig, Wild pig, Rongchang pig, Bamei pig and Licha Black pig respectively revealed 14 polymorphisms in 2078 bp. Hudson-Kreitman-Aguade's results showed that a nucleotide diversity(π) of south west type pigs,north type pigs, deloped and imported breeds and all breeds were 0. 18%, 0. 25%, 0. 29%, 0. 25%, respectively; the Tajima's D value of south west type pigs, north type pigs and all breeds were -0.52, 0.76 and -0. 60, respectively; the Fu and Li's D value of south west type pigs, north type pigs and all breeds were -0.30, 0.72 and -0.17, respectively. This results indicated that the SNPs of H-FABP intron 2 were very polymorphic in different breeds, and also, the Neighbour-Joining trees of their haplotypes did not show a geographical arrangement for any of the genes, we inferred some loci which may infect intra muscular fat(IMF).

关键词

/H-FABP基因/多态性/肌内脂肪/候选基因

分类

生物科学

引用本文复制引用

王立刚,张龙超,赵克斌,颜华,王立贤..猪H-FABP基因第2内含子SNPs分布及连锁不平衡遗传模式研究[J].中国畜牧兽医,2011,38(1):122-125,4.

基金项目

国家高技术发展计划"863"项目(2008AA10Z133 ()

2008AA101008)及中国农业科学院基本科研业务费专项(2010jc-4)资助. (2010jc-4)

中国畜牧兽医

OA北大核心CSTPCD

1671-7236

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