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山羊地方性鼻内肿瘤病毒ENTV-SC株基因组cDNA文库的构建及生物信息学分析

冯迎春 颜其贵 郭万柱 王小玉 舒蕾

中国兽医科学2011,Vol.41Issue(2):126-130,5.
中国兽医科学2011,Vol.41Issue(2):126-130,5.

山羊地方性鼻内肿瘤病毒ENTV-SC株基因组cDNA文库的构建及生物信息学分析

Construction and bioinformatics analysis of cDNA library of goat enzootic nasal tumor virus SC strain

冯迎春 1颜其贵 1郭万柱 2王小玉 1舒蕾1

作者信息

  • 1. 四川农业大学动物生物技术中心,四川雅安625014
  • 2. 动物疫病与人类健康四川省重点实验室,四川雅安625014
  • 折叠

摘要

Abstract

In order to obtain the cDNA library of goat enzootic nasal tumor virus(ENTV) SC strain,5 fragments of ENTV,LTR,gag,pro,pol and env were amplified by RT-PCR from nasal fluid of goats with enzootic nasal tumor using the primers designed referencing to gene sequence of ENTV-2, respectively. The amplified 5 fragments were cloned into the pMD18-T vector and sequenced. The results showed that the sequence was 7 168 bp in size and exhibited a genetic organization characteristic of type B and D oncoviruses.ENTV SC strain was highly related to the ENTV-2 sequenced in 2003. The nucleotide homology of ENTV-2, LTR,gag, pro, pol and env shared 91.0 %, 88.0 %, 88. 6 %, 89.3 % and 91.0 %, respectively. ENTV SC closely related to the retrovirus(ENTV-1) associated with enzootic adenocarcinoma of sheep,and to jaagsiekte sheep retrovirus. The main sequence difference between these viruses resided in a small regions in the transmembrane regions of env and gag and the LTR.

关键词

山羊/地方性鼻内肿瘤病毒/cDNA文库/生物信息学分析

分类

农业科技

引用本文复制引用

冯迎春,颜其贵,郭万柱,王小玉,舒蕾..山羊地方性鼻内肿瘤病毒ENTV-SC株基因组cDNA文库的构建及生物信息学分析[J].中国兽医科学,2011,41(2):126-130,5.

基金项目

教育部"长江学者和创新团队发展计划"创新团队项目(IRT0848) (IRT0848)

科技部科技人员服务企业行动计划项目(2009GJF00049) (2009GJF00049)

中国兽医科学

OA北大核心CSCDCSTPCD

1673-4696

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