中国农业大学学报2011,Vol.16Issue(4):134-140,7.
苹果EST数据分析平台的构建及初步应用
Construction of EST-data analysis platform for Malus domestica and its preliminary application
摘要
Abstract
In order to use ESTs data for Malus domestica more efficiently and conveniently,an EST-data analysis platform as being named "Malus domestica Micro-Workstation" was constructed and a sequence extending system was built on this basis.Upon test with the platform,the drought stress-related genes from 324 308 ESTs of Malus domestica were examed for prediction.The results showed that 1 979 sequences of the drought stress-related genes were found,in which 109 sequences were identified with potentially full-length coding regions.A total of 959 drought stress-related sequences may be down-regulated,while the other 1 020 sequences may be up-regulated.Then these drought stress-related sequences were classified into various functional types,according to cellular component,molecular function or biological process.The data analysis platform could be used for apple biotechnology research such as local inquiry,sequence annotation,sequence extension and so on.关键词
苹果/EST/数据分析平台/序列延伸/干旱胁迫Key words
Malus domestica/EST/data analysis platform/sequence extend/drought stress分类
农业科技引用本文复制引用
岳鹏,钟翡,雷恒久,柳爱玲,刘兰英,李天红..苹果EST数据分析平台的构建及初步应用[J].中国农业大学学报,2011,16(4):134-140,7.基金项目
国家自然科学基金资助项目(30871696) ()
公益性行业(农业)科研专项经费项目(201003021) ()