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基于类别保留投影的基因表达数据特征提取新方法

王文俊

电子学报2012,Vol.40Issue(2):358-364,7.
电子学报2012,Vol.40Issue(2):358-364,7.DOI:10.3969/j.issn.0372-2112.2012.02.024

基于类别保留投影的基因表达数据特征提取新方法

New Method of Feature Extraction for Gene Expression Data Based on Class Preserving Projection

王文俊1

作者信息

  • 1. 西安电子科技大学计算机学院,陕西西安710071
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摘要

Abstract

A new method of discriminant feature extraction,called Class Preserving Projection (CPP) ,is proposed from the point view of class relation of pairwise samples. Compared to LDA, CPP has the following two advantages. One is that the optimal subspace dimension is not restricted to the number of categories of samples, and the other is that computational complexity is lower. Experiments are performed on gene expression data for sample classification, and the results confirm the effectiveness of the method. Kernel CPP (KCPP) is presented by generalizing CPP to nonlinear space to solve the problem of nonlinear feature extraction, and the experiments on gene expression data verify the feasibility of the method.

关键词

特征提取/fisher线性鉴别分析/小样本/基因表达数据

Key words

feature extraction/Fisher's linear discriminant analysis(LDA)/small sample size/gene expression data

分类

信息技术与安全科学

引用本文复制引用

王文俊..基于类别保留投影的基因表达数据特征提取新方法[J].电子学报,2012,40(2):358-364,7.

基金项目

中央高校基本科研业务费专项资金(No.K5051203013) (No.K5051203013)

电子学报

OA北大核心CSCDCSTPCD

0372-2112

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