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三疣梭子蟹多态性微卫星DNA标记的筛选及评价

韩智科 刘萍 李健 高保全 陈萍

渔业科学进展2012,Vol.33Issue(1):72-78,7.
渔业科学进展2012,Vol.33Issue(1):72-78,7.

三疣梭子蟹多态性微卫星DNA标记的筛选及评价

Screening and evaluation of Portunus trituberculatus polymorphic microsatellite DNA markers

韩智科 1刘萍 2李健 1高保全 1陈萍1

作者信息

  • 1. 农业部海洋渔业资源可持续利用重点开放实验室中国水产科学研究院黄海水产研究所,青岛266071
  • 2. 上海海洋大学,201306
  • 折叠

摘要

Abstract

A microsatellite enriched library of P. Trituberculatu was constructed following the FIASCO method. Seventy-one pairs of primers were designed according to the sequences containing microsatellite motifs. Twenty-one loci were polymorphic after the evaluation of 71 loci based on genetic diversity analysis of a wild population comprising of 30 individuals for. A total of 188 alleles were obtained with an average of 8. 9 alleles per locus. The number of alleles per locus amplified was significantly different, ranging from 3 to 13. The number of alleles obtained for the loci Pot8, Pot37, Pot48, Pot53, Pot54, Pot66 was 11,12,12,11,13 and 11, respectively, and Pot46 got only three alleles. Allele size distribution was in the range of 131 ~ 312bp, which is basically in line with the design theory of primer product length. Twenty-onemicrosatellite loci of expected heterozygosity were in the range of 0. 659 ~ 0. 889, and PIC values were higher than 0. 5. The results indicated that they have a high heterozygosity, which can be used for P. Trituberculatus population genetic structure, species breeding, and germ-line assessment of microsatellite DNA.

关键词

三疣梭子蟹/微卫星标记/多态性/遗传多样性

Key words

Portunus triuberbuculatus/Microsatellite marker/Polymorphic Genetic diversity

分类

生物科学

引用本文复制引用

韩智科,刘萍,李健,高保全,陈萍..三疣梭子蟹多态性微卫星DNA标记的筛选及评价[J].渔业科学进展,2012,33(1):72-78,7.

基金项目

国家高技术研究发展计划项目(2006AA10A406、2012AA10A409)和国家自然科学基金(30871933、40806067)共同资助 (2006AA10A406、2012AA10A409)

渔业科学进展

OA北大核心CSCDCSTPCD

2095-9869

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