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DNA序列的甲基化特征提取软件

戴胜冬 杨昆 顾靓 王路路

生物信息学2012,Vol.10Issue(1):5-7,3.
生物信息学2012,Vol.10Issue(1):5-7,3.DOI:10.3969/j.issn.1672-5565.2012.01.02

DNA序列的甲基化特征提取软件

Sofware for extracting the features of DNA methylation

戴胜冬 1杨昆 1顾靓 1王路路1

作者信息

  • 1. 杭州电子科技大学计算机学院,浙江杭州310018
  • 折叠

摘要

Abstract

Extracting the feature is one important step for predicting the methylation status of DNA sequence. However, every proposed method was just devised on some features and the calculation process of quantitative feature is complicated. In this paper, we collected the features used in published papers, then designed and implemented the software of extracting these features for DNA sequence. This software can easily process a batch of target sequences and facilitate the subsequent data analysis and mining.

关键词

DNA甲基化/特征提取/CpG岛/BLAT/软件

Key words

DNA methylation/ feature extraction/ CpG island/ BLAT/ Software

分类

生物科学

引用本文复制引用

戴胜冬,杨昆,顾靓,王路路..DNA序列的甲基化特征提取软件[J].生物信息学,2012,10(1):5-7,3.

基金项目

国家自然科学基金(No.60903086). (No.60903086)

生物信息学

1672-5565

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