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蓖麻基因组中一种Mutator-like类型MITEs元件的结构分析和鉴定

周新成 王海燕 胡梅珍 李正绪 卢诚 王文泉

热带作物学报2012,Vol.33Issue(2):327-331,5.
热带作物学报2012,Vol.33Issue(2):327-331,5.DOI:10.3969/j.issn.1000-2561.2012.02.022

蓖麻基因组中一种Mutator-like类型MITEs元件的结构分析和鉴定

Identification and Characterization of Mutator-like MITEs in Castor Bean Genome

周新成 1王海燕 1胡梅珍 1李正绪 1卢诚 1王文泉1

作者信息

  • 1. 中国热带农业科学院热带生物技术研究所 农业部热带作物生物学与遗传资源利用重点实验室,海南海口571101
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摘要

Abstract

Mutator-like MITEs were identified and characterized from castor bean (Ricinus communis L) genome using bioinformatics methods. There were seventy-six Mutator-like MITEs less than 3 kb in length in castor bean, of which 53 elements, about 69.7% in total, being less than 1000 bp. Forty-two MITEs were located in intergenic regions, 11 in nitrons and 8 and 4 elements in 5' UTR and 3' DTK regions, respectively. Only one element was inserted in the coding region of gene. Twenty-nine pack-MITEs were found containing gene fragment sequences unrelated to transposase gene. And some pack-MITEs carried with the sequence fragments belonging to the same gene. The results showed that Mutator-like MITEs may play potential roles in the regulation of gene expression and genome evolution in castor bean.

关键词

MITEs/Mutator-like/蓖麻/转座子

Key words

MITEs/ Mutator-like/ Castor bean/ Ricinus communis L/ Transposon

分类

生物科学

引用本文复制引用

周新成,王海燕,胡梅珍,李正绪,卢诚,王文泉..蓖麻基因组中一种Mutator-like类型MITEs元件的结构分析和鉴定[J].热带作物学报,2012,33(2):327-331,5.

基金项目

国家973项目课题"木薯淀粉高效累积途径及其关键基因"(2010CB126601) (2010CB126601)

国家木薯产业技术体系生物技术岗(CARS-12). (CARS-12)

热带作物学报

OA北大核心CSCDCSTPCD

1000-2561

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