华东理工大学学报：自然科学版2012，Vol.38Issue(4)：472-476,5.
基于GPU运算的宏基因组第二代测序模拟软件
Next-Generation-Sequencing Simulator for Metagenomics by Using GPU
摘要
Abstract
A customizable metagenome simulation system--NeSSM （Next-Generation Sequencing Simulator for Metagenomies） is presented here. By combining all the available genomes currently and some initial metagenome sequencing information, the system can create a simulated metagenome closer-than-ever to the reality. In order to reduce the system running time, we used the highly-parallel arithmetic by using GPU. Currently, NeSSM supports 454 and Illumina sequencing platforms.关键词
宏基因组/GPU/模拟系统/测序平台Key words
metagenomics/GPU/simulation system/sequencing platform分类
生物工程引用本文复制引用
宣黎明,韦朝春,李亦学..基于GPU运算的宏基因组第二代测序模拟软件[J].华东理工大学学报：自然科学版,2012,38(4):472-476,5.基金项目
上海浦江项目(09PJ1407900) （09PJ1407900）
