南京工业大学学报（自然科学版）2012，Vol.34Issue(5)：128-132,5.DOI:10.3969/j.issn.1671-7627.2012.05.025
不同DNA序列映射对频谱3-周期性的影响
Numerical mappings of DNA sequences and their effects on 3-base periodicity behavior
邵建峰 1邵伟 2严晓华 1赵剑1
作者信息
- 1. 南京工业大学理学院,江苏南京 210009
- 2. 南京工业大学电子与信息工程学院,江苏南京 210009
- 折叠
摘要
Abstract
After mapping the DNA sequence into numerical sequences, the 3-base periodicity behavior of the sequence was recognized as an important property for distinguishing coding regions from non-coding regions. Common mappings were divided into 4 groups and their relationships were discussed. The Parzen window estimation approach was used to obtain a signal-to-noise threshold,by which the classification accuracy and the performance of different mappings could be calculated. Based on the signal to noise curve of the walk sequence, two features of non-oscillation, sensitivity and vibration were proposed to illustrate the efficiency of different mappings.关键词
3-周期性/序列映射/基因识别/信噪比阈值/分类正确率/敏感性/非震荡性Key words
3-base periodicity/ DNA mapping/ gene recognition/ SNR threshold/ classification accuracy / sensitivity/ non-oscillation分类
生物科学引用本文复制引用
邵建峰,邵伟,严晓华,赵剑..不同DNA序列映射对频谱3-周期性的影响[J].南京工业大学学报（自然科学版）,2012,34(5):128-132,5.
