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Gene chip array for differentiation of mycobacterial species and detection of drug resistance

SHI Xiao-chun LIU Xiao-qing XIE Xiu-li XU Ying-chun ZHAO Zhi-xian

中华医学杂志(英文版)2012,Vol.125Issue(18):3292-3297,6.
中华医学杂志(英文版)2012,Vol.125Issue(18):3292-3297,6.DOI:10.3760/cma.j.issn.0366-6999.2012.18.018

Gene chip array for differentiation of mycobacterial species and detection of drug resistance

Gene chip array for differentiation of mycobacterial species and detection of drug resistance

SHI Xiao-chun 1LIU Xiao-qing 1XIE Xiu-li 2XU Ying-chun 2ZHAO Zhi-xian3

作者信息

  • 1. Department of Infectious Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100730, China
  • 2. Department of Laboratory, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100730, China
  • 3. CapitalBio Corporation, National Engineering Research Center for Beijing Biochip Technology, Beijing 102206, China
  • 折叠

摘要

Abstract

Background Gene chip array can differentiate isolated mycobacterial strains using vadous mycobacterium specific probes simultaneously.Gene chip array can evaluate drug resistance to isoniazid and rifampin of tuberculosis strains by detecting drug resistance related gene mutation.This technique has great potential for clinical application.We performed a retrospective study to investigate the capability of gene chip array in the rapid differentiation of species and detection of drug resistance in mycobacterium,and to evaluate its clinical efficacy.Methods We selected 39 patients (54 clinical mycobacterium isolates),used gene chip array to identify the species of these isolates and detect drug resistance to isoniazid and rifampin in Mycobacterium tuberculosis isolates.Meanwhile,these patients' clinical data were analyzed retrospectively.Results Among these 39 patients whose mycopacterium culture were positive,32 patients' isolates were identified as Mycobacterium tubercu/osis, all of them were clinical infection. Seven patients' isolates were identified as non-tuberculosis mycobacterium.Analyzed with their clinical data,only two patients were considered as clinical infection,both of them were diagnosed as hematogenous disseminated Mycobacterium introcellulare infection.The other five patients' isolates were of no clinical significance; their clinical samples were all respiratory specimens.Clinical manifestations of tuberculosis and non-tuberculous mycobacterial infections were similar.Isoniazid resistance was detected in two tuberculosis patients,while rifampin resistance was detected in one tuberculosis patient; there was another patient whose Mycobacterium tuberculosis isolate was resistant to both isoniazid and rifampin (belongs to multidrug resistance tuberculosis).The fact that this patient did not respond to routine anti-tuberculosis chemotherapy also confirmed this result.Conclusions Gene chip array may be a simple,rapid,and reliable method for the identification of most mycobacterial species and detection of drug resistance in Mycobacterium tuberculosis.It is useful in diagnosis,treatment,and hospital infection control of mycobacterial infections,and it may have a great potential for clinical application.

关键词

Mycobacterium tuberculosis/gene chip

Key words

Mycobacterium tuberculosis/gene chip

引用本文复制引用

SHI Xiao-chun,LIU Xiao-qing,XIE Xiu-li,XU Ying-chun,ZHAO Zhi-xian..Gene chip array for differentiation of mycobacterial species and detection of drug resistance[J].中华医学杂志(英文版),2012,125(18):3292-3297,6.

基金项目

This study was supported by a grant from the Major National Science and Technology Projects:AIDS and viral hepatitis and other major infectious diseases (No.2008ZX10003-002). (No.2008ZX10003-002)

中华医学杂志(英文版)

OACSCDCSTPCDMEDLINESCI

0366-6999

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