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两种实时定量RT-PCR方法检测miRNAs表达的技术分析

闵自信 杜小云 宁启兰 钟楠楠 郑悦雯 韩燕 吕社民 张蕊

西安交通大学学报(医学版)2013,Vol.34Issue(2):258-262,5.
西安交通大学学报(医学版)2013,Vol.34Issue(2):258-262,5.

两种实时定量RT-PCR方法检测miRNAs表达的技术分析

Technical analysis for detection and quantification of microRNAs by two real-time quantitative reverse transcription methods

闵自信 1杜小云 1宁启兰 1钟楠楠 1郑悦雯 1韩燕 1吕社民 1张蕊1

作者信息

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摘要

Abstract

Objective To optimize the method for quantifying microRNAs in different experimental purposes and conditions by comparing two real-time quantitative reverse transcription-polymerase chain reaction (RT-qPCR) methods. Methods We isolated the total RNA from the SD rat articular cartilage at postnatal day 21 and day 42 with TRIzol(R) reagent. The RT reactions were performed by stem-loop primers and the universal primer of miRNA detection kit respectively; then real time PCR was performed to test the expressions of rno-miR-15b, rno-miR-16, rno-miR-195 and rno-miR-497. In addition, the total RNAs in human plasma were isolated by using TRI Reagent BD (MRC, TR126) according to the instructions by the manufacturer with two different RT-qPCR methods to quantify the expression of has-miR-16. Results The expression change of these miRNAs was of the same increase trend by the two different RT-qPCR methods, which accorded with the results of our Solexa sequencing. The results of plasma demonstrated that stem-loop RT-qPCR method was relatively sensitive. Conclusion Stem-loop RT-qPCR method shows the advantages of testing a few important miRNAs while the detection kit method applies to screening a large number of miRNAs.

关键词

miRNAs/茎环引物/实时定量反转录聚合酶链反应/软骨/血浆

Key words

miRNAs/ stem-loop primer/ real-time quantitative reverse transcription-polymerase chain reaction (RT-qPCR)/ cartilage/ plasma

分类

医药卫生

引用本文复制引用

闵自信,杜小云,宁启兰,钟楠楠,郑悦雯,韩燕,吕社民,张蕊..两种实时定量RT-PCR方法检测miRNAs表达的技术分析[J].西安交通大学学报(医学版),2013,34(2):258-262,5.

基金项目

国家自然科学基金资助项目(No.81170017) (No.81170017)

西安交通大学学报(医学版)

OA北大核心CSCDCSTPCD

1671-8259

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