山东农业科学2013,Vol.45Issue(4):8-11,4.
石榴等观赏植物DFR基因生物信息学分析
Bioinformatics Analysis of Dihydroflavonol 4-Reductase Gene from Pomegranate and Other Ornamental Plants
摘要
Abstract
The nucleic acid sequences and amino acid sequences of dihydroflavonol 4 - reductase gene (DFR) from eight species such as Punica granatum L. cv. 'Honghua' , Punka granatum L. cv. ' Fenhua' , Curcuma alismatifolia, Paeonia lactiflora, Saussurea medusa, Dahlia pinnata, Pericallis cruenta and Cymbidi-um were analyzed by bioinformatics methods. Several parameters, including sequences composition, physico-chemical properties, hydrophobicity or hydrophilicity, topological structure of transmembrane regions were predicted. The results indicated that the DFR genes contained only one exon in all these ornamental plants and were abundant with the amino acids of Ala, Gly, Cys and Thr. Most of these DFR proteins were structural stable except those from Punica granatum L. cv. ' Honghua' and ' Fenhua'. All these DFR protein belonged to hydrophilic protein, with evident hydrophobic region, hydrophilic region and transmembrane region.关键词
石榴/二氢黄酮醇4-还原酶(DFR)/生物信息学/理化性质/跨膜结构Key words
Pomegranate/Dihydroflavonol 4 - reductase ( DFR) /Bioinformatics/Physicochemical characteristics/Transmembrane region分类
生物科学引用本文复制引用
陶吉寒,冯立娟,苑兆和,招雪晴,尹燕雷..石榴等观赏植物DFR基因生物信息学分析[J].山东农业科学,2013,45(4):8-11,4.基金项目
山东省自然科学基金项目(ZR2009DM010) (ZR2009DM010)