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猪CB1基因的生物信息学分析

魏星灿 贾青 陶隽 胡慧艳

河南农业科学Issue(12):129-132,4.
河南农业科学Issue(12):129-132,4.

猪CB1基因的生物信息学分析

Bioinformatics Analysis on Cannabinoid Receptors 1 of Swine

魏星灿 1贾青 1陶隽 2胡慧艳1

作者信息

  • 1. 河北农业大学动物科技学院,河北保定071000
  • 2. 国家北方山区农业工程技术研究中心,河北保定071000
  • 折叠

摘要

Abstract

In the study ,the phylogenetic relationship of the coding sequences (CDS) of CB1 gene between swine and other 21 species ,and the physicochemical characters and structural properties of CB1-encoding protein in swine were analyzed with bioinformatics methods .The results showed that the homology of CB1 gene was high as purifying selection could exist in its evolution .The CB1 protein was a hydrophobic transmembrane protein consisting of 472 amino acid residues without signal peptide .The primary structure of the protein CB1 contained 23 phosphorylation sites and 6 glycosylation sites ,the secondary structure was made up of 47 .67% of α-helix , 39 .62% of random coil ,12 .71% of extended strand ,the tertiary structure was composed of 7α-heli-ces and random coil .The results indicate that CB1 maybe is a housekeeping gene of mammals and the 7 connected α-helices are active sites of CB1 in swine .

关键词

/大麻素1型受体基因/生物信息学

Key words

swine/cannabinoid receptor 1 gene/bioinformatics

分类

农业科技

引用本文复制引用

魏星灿,贾青,陶隽,胡慧艳..猪CB1基因的生物信息学分析[J].河南农业科学,2013,(12):129-132,4.

基金项目

河北省现代农业产业技术体系创新团队建设专项资金项目 ()

河南农业科学

OA北大核心CSCDCSTPCD

1004-3268

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