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CLIP相关技术的研究进展

邢伶越 张彦 黄静 李平 王洋 师明磊 赵志虎

军事医学Issue(11):867-869,3.
军事医学Issue(11):867-869,3.DOI:10.7644/j.issn.1674-9960.2013.11.017

CLIP相关技术的研究进展

Cross-linking and immunoprecipitation assay and its development

邢伶越 1张彦 2黄静 3李平 1王洋 2师明磊 3赵志虎3

作者信息

  • 1. 安徽大学生命科学学院,合肥 230601
  • 2. 军事医学科学院生物工程研究所,北京100071
  • 3. 军事医学科学院生物工程研究所,北京100071
  • 折叠

摘要

Abstract

It′s reported that RNA-binding proteins ( RBP) play key roles in post-transcriptional regulation of eukaryotic genes.The aberrations of RBP are associated with a large number of human disorders , particularly autoimmune and neuro-logic diseases .The interaction between RNA and proteins has been widely explored since the development of the method known as RNA immunoprecipitation with differential display or microarray analysis (RIP-ChIP) around the year of 2000. Since then, diverse derivatives of the RIP-ChIP, such as ultraviolet crosslinking and immunoprecipitation ( CLIP), high-throughput sequencing of CLIP cDNA library (HITS-CLIP), photoactivatable -ribonucleoside-enhanced crosslinking and immunoprecipitation ( PAR-CLIP) , and individual nucleotide resolution CLIP ( iCLIP ) have been developed .All these methods have some advantages over the original RIP-ChIP and greatly facilitate the study of RBP-RNA interactions .Addi-tionally , aided by the next-generation sequencing , transcriptome-wide identification of RBP target sites has become possible and the RNA-binding site resolution of RBP has also improved to some degree .We introduced the basic principles and processes of the interactions between proteins and RNA , focusing on the advantages , disadvantages and prospect of the present genome-wide version of CLIP .

关键词

CLIP/紫外交联/免疫沉淀法/RNA结合蛋白质类

Key words

CLIP/ultraviolet crosslinking/immunoprecipitation/RNA-binding proteins

分类

生物科学

引用本文复制引用

邢伶越,张彦,黄静,李平,王洋,师明磊,赵志虎..CLIP相关技术的研究进展[J].军事医学,2013,(11):867-869,3.

基金项目

军事医学科学院创新基金资助项目 ()

军事医学

OA北大核心CSCDCSTPCD

1674-9960

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