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nc2Cancer:一个研究与癌症相关人类非编码RNA的数据库

程卓 刘珂 严章明 向书念 孙之荣

生物信息学Issue(2):77-81,5.
生物信息学Issue(2):77-81,5.DOI:10.3969/j.issn.1672-5565.2015.02.01

nc2Cancer:一个研究与癌症相关人类非编码RNA的数据库

nc2Cancer:a database for cancer-associated human ncRNAs

程卓 1刘珂 1严章明 1向书念 1孙之荣1

作者信息

  • 1. 清华大学生命科学学院教育部生物信息学重点实验室,北京100084
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摘要

Abstract

With the rapid development of high⁃throughput sequencing technology, many new types of non⁃coding RNAs (such as lncRNAs and circular RNAs) have been identified. Previous studies have shown that these non⁃coding RNAs play critical roles in gene regulation and have strong associations with cancers. However, since we know little on how the ncRNAs excute their functions, it remains a challenge for us to fully identify the associations between ncRNAs and human cancer. To facilitate the study of this field, we analyzed large⁃scale RNA⁃RNA interaction data and constructed a database named nc2Cancer(http://www.bioinfo.tsinghua.edu.cn/nc2Cancer/index.php), a web resource which aims to provide comprehensive associations between ncRNAs and cancer. Currently, nc2Cancer covers three types of non⁃coding RNAs ( lncRNAs, circular RNAs and RNAs transcribed from pseudogenes) . This study will greatly expand the understanding of ncRNA functions and their possible roles in cancer development.

关键词

非编码RNA/癌症/MicroRNA/RNA相互作用网络

Key words

ncRNA/Cancer/microRNA/RNA-RNA network

分类

信息技术与安全科学

引用本文复制引用

程卓,刘珂,严章明,向书念,孙之荣..nc2Cancer:一个研究与癌症相关人类非编码RNA的数据库[J].生物信息学,2015,(2):77-81,5.

基金项目

国家973计划( No.2012CB925203),国家自然科学基金( No.31171274)。 ()

生物信息学

1672-5565

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