计算机技术与发展Issue(8)：55-58,62,5.DOI:10.3969/j.issn.1673-629X.2014.08.013
基于多态并行处理器的生物计算并行实现
Implementation of Parallel Biological Computing Based on Polymorphous Parallel Processor
摘要
Abstract
Aiming at the problems of large amount of data and computing,and power consumption for the conserved sequence identifying and the longest common sub-sequence in DNA of traditional biological computing,propose two parallel computing algorithms of based on PAAG polymorphic parallel processor. This parallel processor can support the multiple parallelism of data, thread and instruction. Through programming,develop the corresponding serial and parallel procedure in PE,realizing the parallel of different granularity algo-rithm. Experimental results demonstrate that the proposed method is very effective in identifying the optimal motif and computing the lon-gest common sub-sequence.关键词
PAAG多态并行处理器/并行算法/模体识别/最长公共子序列Key words
PAAG polymorphic parallel processor/parallel algorithm/identifying motif/the longest common sub-sequence分类
信息技术与安全科学引用本文复制引用
刘玉荣,李涛..基于多态并行处理器的生物计算并行实现[J].计算机技术与发展,2014,(8):55-58,62,5.基金项目
国家自然科学基金重点资助项目(61136002) （61136002）
陕西省科学技术研究发展计划资助项目(2011K06-47) （2011K06-47）
