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苎麻 Genomic -SSR 与 EST -SSR 分子标记遗传差异性分析

刘晨晨 栾明宝 陈建华 王晓飞 许英 孙志民

中国麻业科学Issue(2):57-63,7.
中国麻业科学Issue(2):57-63,7.

苎麻 Genomic -SSR 与 EST -SSR 分子标记遗传差异性分析

Genetic Differences in Ramie Analyzed between Genomic -SSR and EST -SSR

刘晨晨 1栾明宝 1陈建华 1王晓飞 1许英 1孙志民1

作者信息

  • 1. 中国农业科学院麻类研究所,长沙 410205
  • 折叠

摘要

Abstract

In order to clarify the genetic differences among different SSRs,Genomic -SSR and EST-SSR were used to analyze the genetic diversity of 19 important ramie genetic resources.According to the statistical results,the average observed -alleles detected by Genomic -SSR was 3.4643,effective alleles was 2.1982,shannon was 0.8864,heterozygosity was 0.5254,expected heterozygosity was 0.5172.The average observed -alleles detected by EST -SSR was 2.3333,effective alleles was 1.9438,shannon was 0.7120,heterozygosity was 0.5128,expected heterozygosity was 0.4778.There were no significant differences in effective number of alleles (Ne)and observed heterozygosity (Ho)be-tween Genomic -SSR and EST -SSR.Genomic -SSR Shannon index was significantly higher than that of EST -SSR.The above results showed there were significant genetic differences in marker polymor-phism and genotype identification between Genomic -SSR and EST -SSR,but the two kinds of markers could also effectively identify different genotypes.Genomic -SSR had priority for molecular identifica-tion,construction of high -density genetic linkage map and analysis of genetic diversity,EST -SSR had more advantages of studying the genetic diversity among close ramie species,evolutionary analysis,ge-netic map and comparative genomics.

关键词

苎麻/遗传差异性/分子标记/Genomic -SSR/EST -SSR

Key words

ramie/genetic differences/molecular marker/Genomic -SSR/EST -SSR

分类

农业科技

引用本文复制引用

刘晨晨,栾明宝,陈建华,王晓飞,许英,孙志民..苎麻 Genomic -SSR 与 EST -SSR 分子标记遗传差异性分析[J].中国麻业科学,2015,(2):57-63,7.

基金项目

国家自然科学基金(31471547;30900913);湖南省自然科学基金(13JJ4116);国家科技支撑计划 ()

中国麻业科学

OACSTPCD

1671-3532

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