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基于 SYBR Green 检测小麦黄花叶病毒的两步法 qPCR

刘成 刘建军 小松田隆夫 铃木孝子 佐久间俊 宋健民 李豪圣 刘爱峰 曹新有 韩冉 宫文萍

山东农业科学2016,Vol.48Issue(7):118-124,132,8.
山东农业科学2016,Vol.48Issue(7):118-124,132,8.DOI:10.14083/j.issn.1001-4942.2016.07.027

基于 SYBR Green 检测小麦黄花叶病毒的两步法 qPCR

SYBR Green -Based Two -Step Real Time Quantitative PCR (qPCR)for Detection of Wheat yellow mosaic virus

刘成 1刘建军 2小松田隆夫 1铃木孝子 3佐久间俊 4宋健民 3李豪圣 1刘爱峰 1曹新有 1韩冉 1宫文萍1

作者信息

  • 1. 山东省农业科学院作物研究所/农业部黄淮北部小麦生物学与遗传育种重点实验室/小麦玉米国家工程实验室,山东 济南 250100
  • 2. 日本国立农业生物资源研究所,茨城 筑波 305 -8602
  • 3. 日本国立农业生物资源研究所,茨城 筑波 305 -8602
  • 4. 北海道中央农业试验站,北海道 长沼 069 -1395
  • 折叠

摘要

Abstract

Wheat yellow mosaic virus disease,a common disease in wheat growing regions,can cause severe wheat yield loss.In order to establish proper real time quantitative PCR (qPCR)method for the detec-tion of Wheat yellow mosaic virus (WYMV)copy number,the sequences of different WYMV isolates were a-ligned,as a result,total 11 pairs of primers were designed based on the conserved region sequence,and their annealing temperatures were optimized.Then,the standard curves of these 11 primer pairs were established, respectively.The results showed that the PCR efficiencies of 11 primer pairs ranged from 50.60% to 116.04%,and only two primer pairs could be used for further research with the PCR efficiencies of 97.21%(WY -05 and WY -06)and 91.85% (WY -F2 and WY -R2).In order to testify their utility,the qPCR using WY -F2 and WY -R2 as primer pair was performed on WYMV resistant wheat varieties,susceptible wheat varieties and F2 segregating population consisting of 266 individual plants which derived from wheat re-sistant/susceptible combination.The results indicated that the WYMV copy numbers of resistant and suscepti-ble wheat varieties were highly significantly different.The sensitivity of the qPCR method was more higher than that of enzyme -linked immunosorbent assay,so it was more suitable for phenotype identification of the segre-gating population,and could be used for genetic mapping and map -based cloning of WYMV resistant gene.

关键词

小麦黄花叶病毒/两步法 qPCR/酶联免疫吸附剂测定法

Key words

Wheat yellow mosaic virus/Two -step real time quantitative PCR/Enzyme -linked immu-nosorbent assay

分类

植物保护学

引用本文复制引用

刘成,刘建军,小松田隆夫,铃木孝子,佐久间俊,宋健民,李豪圣,刘爱峰,曹新有,韩冉,宫文萍..基于 SYBR Green 检测小麦黄花叶病毒的两步法 qPCR[J].山东农业科学,2016,48(7):118-124,132,8.

基金项目

日本农林水产省和学术振兴会项目(TRS1003、P11515);国家现代农业产业技术体系专项(CARS -03-1-8);山东省农业科学院青年拔尖人才科研启动费(1-18-24);泰山学者种业计划项目;山东省自主创新重大关键技术项目 ()

山东农业科学

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