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基于线粒体16S rRNA基因的14种造礁石珊瑚系统发育关系分析

廖宝林 肖宝华 杨小东 谢子强

广东海洋大学学报2016,Vol.36Issue(4):23-29,7.
广东海洋大学学报2016,Vol.36Issue(4):23-29,7.DOI:10.3969/j.issn.1673-9159.2016.04.005

基于线粒体16S rRNA基因的14种造礁石珊瑚系统发育关系分析

Phylogenetic Analysis for 14 Species of Reef-building Corals Based on 16S rRNA genes

廖宝林 1肖宝华 1杨小东 2谢子强1

作者信息

  • 1. 广东海洋大学深圳研究院,广东深圳 518108
  • 2. 广东海洋大学,广东湛江 524025
  • 折叠

摘要

Abstract

Partial sequences of 16S rRNA from 14 species of reef-building coralsin Dalajia Island and Xiaolajia Island were amplified and sequenced, and Base ratio and genetic distances were analyzed. The result indicated that the average A+T of this region accounted for 63.5% from 14 species; A+T contents of 16S rRNA fragments werehigher than G+C obviously. The sequences of 16S rRNA fragments had a high degree of saturation.The average genetic distance was 0.179 from 14 species.According to the Neighbour-joining,Maximum-likelihood and Minimum-evolution trees,the separated Faviidae was the root clade, and the second clade was composed of Agariciidae, Acroporidae,Poritidae and Oculinidae.TheHydnophora exesa of Merulinidae merged into the Faviidae.The result suggested that morphological classification may be limited by coral skeletons plasticity.

关键词

造礁石珊瑚/16S rRNA/分子系统学

Key words

Reef-building corals/16SRNA/Molecular phylogenetics

分类

农业科技

引用本文复制引用

廖宝林,肖宝华,杨小东,谢子强..基于线粒体16S rRNA基因的14种造礁石珊瑚系统发育关系分析[J].广东海洋大学学报,2016,36(4):23-29,7.

基金项目

广东省公益研究与能力建设专项(K15216);广东省海洋渔业科技推广专项 (K15216)

广东海洋大学学报

OACHSSCDCSTPCD

1673-9159

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