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大豆种子蛋白质组样品制备方法研究

林杨杰 赵明 杨生超 潘映红

大豆科学2016,Vol.35Issue(5):810-817,8.
大豆科学2016,Vol.35Issue(5):810-817,8.DOI:10.11861/j.issn.1000-9841.2016.05.0810

大豆种子蛋白质组样品制备方法研究

A Study on Sample Preparations for Proteomics of Soybean Seeds

林杨杰 1赵明 2杨生超 3潘映红1

作者信息

  • 1. 云南农业大学农学与生物技术学院,云南昆明650201
  • 2. 中国农业科学院国家农作物基因资源与基因改良重大科学工程,北京100081
  • 3. 中国农业科学院作物科学研究所,北京100081
  • 折叠

摘要

Abstract

By using pheno meth anolammonium acetate,TCA acetone or urea thiourea methods,seed proteins of soybean Zhonghuang 13 were extracted at first and second step.In order to explore the efficient methods of preparing sample for proteomics of soybean seeds.The protein extraction obtained by urea thiourea method at first step and the protein extraction obtained by pheno meth anolammonium acetate method at second step,and the first step extracted protein,which was separated further by one-dimensional electrophoresis,were analyzed with nano-LC-MS/MS respectively.The results showed that the protein yield of first and second extractions obtained by urea thiourea method and following by pheno meth anolammonium acetate method reached 29.18% and 4.08% respectively,and was the highest among extractions obtained by other combined methods.A total of 2 246 protein groups was identified from three replicate samples of first and second extraction,and there were significant differences between them.Average 1 167 protein groups were identified from the sample extracted by urea thiourea,and average 1 868 protein groups from the urea thiourea extracted sample which were separated further by one-dimensional electrophoresis.The results indicated that the effective sample preparation and pre-separation could enhance the yields and identification of the protein from soybean seeds.

关键词

大豆种子/蛋白质组学/样品制备/纳升级液相色谱串联质谱

Key words

Soybean seed/Proteomics/Sample preparation/Nano LC-MS/MS

分类

农业科技

引用本文复制引用

林杨杰,赵明,杨生超,潘映红..大豆种子蛋白质组样品制备方法研究[J].大豆科学,2016,35(5):810-817,8.

基金项目

中国农业科学院科技创新工程(作物分子标记技术及其应用科研创新团队). (作物分子标记技术及其应用科研创新团队)

大豆科学

OA北大核心CSCDCSTPCD

1000-9841

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