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基于miRNAs芯片的喉鳞状细胞癌致癌机制的初步分析

廉猛 刘红刚 翟杰 王茹 王海舟 冯凌 时倩 马泓智 房居高 刘晓琴

中国耳鼻咽喉头颈外科2016,Vol.23Issue(9):501-506,6.
中国耳鼻咽喉头颈外科2016,Vol.23Issue(9):501-506,6.DOI:10.16066/j.1672-7002.2016.09.003

基于miRNAs芯片的喉鳞状细胞癌致癌机制的初步分析

Array profiling identified MiRNAs dysregulation in laryngeal squamous cell carcinoma

廉猛 1刘红刚 2翟杰 1王茹 1王海舟 1冯凌 1时倩 1马泓智 1房居高 1刘晓琴3

作者信息

  • 1. 首都医科大学附属北京同仁医院耳鼻咽喉头颈外科,耳鼻咽喉头颈科学教育部重点实验室 首都医科大学,北京 100730
  • 2. 首都医科大学附属北京同仁医院病理科,头颈部分子病理诊断北京市重点试验室,北京 100730
  • 3. 内蒙古自治区人民医院耳鼻咽喉科,内蒙古 呼和浩特 010010
  • 折叠

摘要

Abstract

OBJECTIVE The purpose of this study was to analyze the screened miRNAs related to tumorigenesis using miRNA array in laryngeal squamous cell carcinoma (LSCC), and provide a set of miRNAs that may be useful for the development of novel diagnostic markers and/or more effective therapeutic strategies from the screened miRNAs in LSCC. METHODS A total number of 5 patients who underwent surgery for primary laryngeal squamous cell carcinoma were recruited for miRNA array analysis. LSCC tissues compared with corresponding adjacent non-neoplastic tissues were analyzed by the Affymetrix GeneChip miRNA Array 3.0 to screen effective miRNAs, and the raw dataset had been submitted to Gene Expression Omnibus. Then mirfocus 3.0 database was adopted to analyze putative regulated miRNAs related to MCM4, a gene related to tumorigenesis we had studied previously in LSCC. Moreover, the selected putative regulated miRNAs were also validated by qRT-PCR in another 21 patients diagnosed as LSCC. RESULTS Analyzed by the miRNAs arrays, there were 127 miRNAs significantly related to tumorigenesis, and 78 showed a higher expression in tumor than in non-tumor tissue while 49 presented the contrasting pattern (P<0.01). Then analyzed by mirfocus 3.0 database, there were 2 putative regulated miRNAs, hsa-miR-24-3p and hsa-miR-183-5p, related to the expression of MCM4. Another miRNA we should focus on was hsa-miR-30a-5p, which was down-expressed obviously analyzed by the miRNA array. The expression of the 3 putative regulated miRNAs were also validated by qRT-PCR in another 21 patients, and the result was the same&nbsp;with that in miRNA array (P<0.05). CONCLUSION The 3 putative miRNAs based on miRNA array analysis, hsa-miR-24-3p, hsa-miR-183-5p and hsa-miR-30a-5p, could be considered as potential diagnostic and therapeutic markers in LSCC. The result will contribute to the understanding of the molecular basis of LSCC and help to improve the treatment.

关键词

肿瘤,鳞状细胞/微RNAs/芯片分析技术/计算生物学

Key words

Neoplasms, Squamous Cell/MicroRNAs/Microchip Analytical Procedures/Computational Biology

引用本文复制引用

廉猛,刘红刚,翟杰,王茹,王海舟,冯凌,时倩,马泓智,房居高,刘晓琴..基于miRNAs芯片的喉鳞状细胞癌致癌机制的初步分析[J].中国耳鼻咽喉头颈外科,2016,23(9):501-506,6.

基金项目

北京市医管局扬帆计划(XMLX201311)、北京市科委重点项目(Z141107002514003)和内蒙古自治区自然科学基金面上项目(2015MS0834)联合资助 ()

中国耳鼻咽喉头颈外科

OACSCDCSTPCD

1672-7002

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