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陆地棉 NF-YB 基因家族的全基因组分析

刘静 徐珍珍 袁娜 郭月 张保龙 杜建厂

华北农学报2016,Vol.31Issue(5):21-27,7.
华北农学报2016,Vol.31Issue(5):21-27,7.DOI:10.7668/hbnxb.2016.05.004

陆地棉 NF-YB 基因家族的全基因组分析

Genome-wide Analysis of NF-YB Gene Family in Gossypium hirsutum L.

刘静 1徐珍珍 2袁娜 1郭月 1张保龙 1杜建厂1

作者信息

  • 1. 江苏省农业科学院 农业生物技术研究所,江苏省农业生物学重点实验室,江苏 南京 210014
  • 2. 江苏省农业科学院 经济作物研究所,农业部长江下游棉花和油菜重点实验室,江苏 南京 210014
  • 折叠

摘要

Abstract

In order to further understand the structure and function of NF-YB gene family,we have systemati-cally investigated the number,subcellular localization,chromosome distribution,evolutionary relationships,motif and tissue expression pattern of of family in the genome of Gossypium hirsutum L.acc.TM-1 by bioinformatics method. 41 NF-YB genes were identified in TM-1 genome;the 41 NF-YB genes contain the same CBFD_NFYB_HMF do-main,and most of them were located in nucleus;they distributed on 1 9 chromosomes,and there were 1 9 pairs of the genes on the A subgroup and D subgroup were orthologous genes;41 NF-YB genes can be divided into groupⅠand groupⅡ,and there were similar motif type and arrangement in each group;.24 NF-YB genes were expressed,but the expression pattern varied among different tissues.

关键词

NF-YB 基因家族/陆地棉/生物信息

Key words

NF-YB gene family/Gossypium hirsutum L./Bioinformatics

分类

生物科学

引用本文复制引用

刘静,徐珍珍,袁娜,郭月,张保龙,杜建厂..陆地棉 NF-YB 基因家族的全基因组分析[J].华北农学报,2016,31(5):21-27,7.

基金项目

江苏省“333”人才工程项目(BRA2013267);江苏省农业科技自主创新基金项目(CX13(3059));棉花生物学国家重点实验室开放课题 ()

华北农学报

OA北大核心CSCDCSTPCD

1000-7091

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