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9个果蔗品种(系)遗传多样性分析及DNA指纹图谱构建

贺尔奇 Pan Yong-Bao 付瑜华 雷石富 李向勇 卢加举 张正学

南方农业学报2016,Vol.47Issue(11):1815-1821,7.
南方农业学报2016,Vol.47Issue(11):1815-1821,7.DOI:10.3969/jissn.2095-1191.2016.11.1815

9个果蔗品种(系)遗传多样性分析及DNA指纹图谱构建

Genetic diversity analysis of nine chewing cane varieties(lines) and construction of their DNA fingerprints

贺尔奇 1Pan Yong-Bao 2付瑜华 1雷石富 1李向勇 1卢加举 1张正学1

作者信息

  • 1. 贵州省亚热带作物研究所,贵州兴义562400
  • 2. USDA-ARS,Sugarcane Research Unit,Houma,Louisiana 70360,USA
  • 折叠

摘要

Abstract

Objective]In order to provide theoretical basis for variety identification and parental selection during su-garcane breeding process,the present study was conducted to analyze genetic diversity of nine chewing cane varieties(lines) and construct their DNA fingerprints. [Method]Combining twenty-one SSR molecular markers with capillary electrophore-sis technique,genetic diversities of nine chewing cane varieties(lines) from four provinces were analyzed,and genetic simi-larity coefficient between tested materials was calculated using NTSYS-pc 2.11. Then nine chewing cane varieties (lines) were clustered for analysis using UPGMA,and their DNA fingerprints were constructed. [Result]Results showed that,a to-tal of 204 bands were amplified from nine chewing cane varieties(lines) using twenty-one pairs of SSR primers,with poly-morphic rate of 75.99%. So every pair of SSR primers could amplify 4-31 bands,with an average of 9.71 bands. Seventeen pairs of primer contained 44 cultivar-specific loci of nine chewing cane varieties(lines). Only five pairs of primers had the strongest ability to discriminate nine chewing cane varieties ( lines ) , and each pair of primer was able to discriminate each chewing cane varieties(lines). However,only three pairs of primers(SMC36BUQ,SMC597CS and SMC851MS),which were characterized by high polymorphism and discriminability and contained cultivar-specific loci,were chosen to con-struct DNA fingerprints of nine chewing cane varieties ( lines ) . Furethermore , genetic similarity coefficients among nine chewing cane varieties(lines) varied from 0.62 to 0.90,with an average of 0.77. UPGMA clustering result showed that,nine chewing cane materials were clustered into three groups,this result was not related to origins of materials. [Conclusion]There are little differences in genetic basis,close genetic relationship and poor genetic diversity among nine chewing cane varieties(lines),so genetic background of parents should be increased in breeding process of new varieties.

关键词

果蔗/SSR/遗传多样性/DNA指纹图谱

Key words

chewing cane/SSR/genetic diversity/DNA fingerprint

分类

农业科技

引用本文复制引用

贺尔奇,Pan Yong-Bao,付瑜华,雷石富,李向勇,卢加举,张正学..9个果蔗品种(系)遗传多样性分析及DNA指纹图谱构建[J].南方农业学报,2016,47(11):1815-1821,7.

基金项目

国家星火计划项目(2014GA820009);贵州省农业攻关项目(黔科合NY[2013]3015号);贵州省科学技术基金 ()

南方农业学报

OA北大核心CSCDCSTPCD

2095-1191

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