福建农业学报2017，Vol.32Issue(2)：134-137,4.DOI:10.19303/j.issn.1008-0384.2017.02.006
基于高通量测序的福安刺葡萄基因组初步研究
A Preliminary Report on Genomics of Vitis davidii Foёx from Fuan District UsingHigh-throughput Genome Sequencing Method
摘要
Abstract
Genetic variants in Vitis davidiifrom Fuan District in Fujian were studied using the high-throughput genome sequencing method.The 8.4 Gb of raw data were analyzed to result in the identification of 3 192 484 non-redundant genetic variants.Distribution of the variants showed 30.34% in the intergenic regionand 3.67% in the exon region.By comparing the genome sequences of the V.davidii under study with those of the entire grape references, 1 863 237 homo-type SNP and 1 244 590 hetero-type SNP were found.It appeared that the V.davidii from Fuan were most likely to be allodiploidy.The study also indicated that using genetic sequencing to determine the genome-wide variants of V.davidii was a viable tool for better understanding of the genetic background of the plant in question.关键词
高通量测序/福安刺葡萄/基因组Key words
high-throughput sequencing/Vitis davidii/genome分类
农业科技引用本文复制引用
陈婷,周平,刘鑫铭,蔡盛华,雷龑..基于高通量测序的福安刺葡萄基因组初步研究[J].福建农业学报,2017,32(2):134-137,4.基金项目
福建省科技计划项目——省属公益类科研院所基本科研专项(2014R1014-9) （2014R1014-9）
现代农业产业技术体系建设专项资金(CARS-30) （CARS-30）
