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固体核磁共振中膜蛋白双交叉极化效率与动力学参数相关的定量分析

孙毅 陈艳可 李建平 赵永祥 杨俊

波谱学杂志2017,Vol.34Issue(3):257-265,9.
波谱学杂志2017,Vol.34Issue(3):257-265,9.DOI:10.11938/cjmr20162528

固体核磁共振中膜蛋白双交叉极化效率与动力学参数相关的定量分析

Efficiency of Double Cross Polarization in Magic-Angle Spinning Solid-State NMR Studies on Membrane Proteins

孙毅 1陈艳可 2李建平 1赵永祥 1杨俊1

作者信息

  • 1. 波谱与原子分子物理国家重点实验室,武汉磁共振中心(中国科学院 武汉物理与数学研究所),湖北 武汉 430071
  • 2. 中国科学院大学,北京 100049
  • 折叠

摘要

Abstract

The efficiency of multiple-dimensional heteronuclear correlation experiments in membrane protein studies is partially determined by the efficiency of double cross polarization (DCP). DCP is a basic block in the pulse sequences to probe the connections between the 15N and 13C nuclei. In this study, three membrane proteins were studied experimentally to determine how the dynamics properties of the proteins affect the DCP efficiency in solid-state heteronuclear correlation experiments. Under the same experimental conditions, the AQPZ protein showed the highest DCP efficiency (31%), while the EV712B protein had the lowest efficiency (14%) and the DAGK protein in between (23%). Longitudinal lattice relaxation time in the rotating frame (T1ρ) and dipole coupling constant (DHN) were also measured for these proteins. It was found that the DCP efficiency depended strongly on T1ρ, but only weakly on DHN. Based on the experimental data, a model to correlate the T1ρ of protein to the DCP efficiency was established, with which the DCP efficiency could be predicted by measuring the T1ρ of membrane proteins.

关键词

固体核磁共振(NMR)/魔角旋转(MAS)/膜蛋白/双交叉极化(DCP)/旋转坐标下的自旋-晶格弛豫时间(T1ρ)

Key words

solid-state NMR/magic-angle spinning (MAS)/membrane protein/double cross polarization (DCP)/T1ρ

分类

数理科学

引用本文复制引用

孙毅,陈艳可,李建平,赵永祥,杨俊..固体核磁共振中膜蛋白双交叉极化效率与动力学参数相关的定量分析[J].波谱学杂志,2017,34(3):257-265,9.

基金项目

国家自然科学基金资助项目(10675162). (10675162)

波谱学杂志

OA北大核心CSCDCSTPCD

1000-4556

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