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南极欺骗岛土壤细菌群落结构和多样性分析

王健 孙云峰 李晨曦 吴玥 李艳红 杨志伟

极地研究2017,Vol.29Issue(4):486-495,10.
极地研究2017,Vol.29Issue(4):486-495,10.DOI:10.13679/j.jdyj.2017.4.486

南极欺骗岛土壤细菌群落结构和多样性分析

BACTERIAL COMMUNITY COMPOSITION AND DIVERSITY IN SOILS OF DECEPTION ISLAND, ANTARCTIC

王健 1孙云峰 1李晨曦 2吴玥 1李艳红 1杨志伟1

作者信息

  • 1. 首都师范大学生命科学学院,北京 100048
  • 2. 密歇根州立大学自然科学学院,美国 48824
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摘要

Abstract

Un-cultivation and cultivation methods based on 16S rDNA gene sequences were applied to determine the bacterial community composition and diversity in soil from Deception Island, Antarctic. The 16S rDNA clone library analysis revealed that the cloned sequences were assigned to 39 operational taxonomic units (OTUs) in three phyla, namelyActinobacteria,Proteobacteria, andBacteroidetes. The dominant phyla Ac-tinobacteria andProteobacteria accounted for 65.25% and 28.81% of the total clones, respectively. The dominant genera of Actinobacteria wereSporichthya,Nocardioides,Conexibacter, Gaiella,andArthrobac-ter. The dominant genera ofProteobacteriawere Sphingomonas,Thiobacillus,Stenotrophomona, and Thermomonas. A total of 57 isolates were obtained and were assigned to 13 OTUs in four phyla, namelyAc-tinobacteria,Proteobacteria,Bacteroidetes,andFirmicutes. The dominantActinobacteria andProteo-bacteria accounted for 57.89% and 31.58% of the isolates, respectively. The dominant genera wereArthro-bacterandLeifsoniafromActinobacteria andPseudomonas fromProteobacteria. This study provides im-portant insights into soil bacterial diversity and beneficial microbial resources from Deception Island, Ant-arctic.

关键词

南极/欺骗岛/细菌多样性/16SDNA/克隆文库/培养方法

Key words

Antarctic/Deception Island/Bacterial diversity/16S rDNA clone library/Cultivation method

引用本文复制引用

王健,孙云峰,李晨曦,吴玥,李艳红,杨志伟..南极欺骗岛土壤细菌群落结构和多样性分析[J].极地研究,2017,29(4):486-495,10.

基金项目

北京市教育委员会科技计划面上项目(No. KM201510028010),国家自然科学基金(30670035)资助 (No. KM201510028010)

极地研究

OA北大核心CSCDCSTPCD

1007-7073

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