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基于特征相关性选择的二硫键预测算法

刘坤

计算机与数字工程2017,Vol.45Issue(11):2093-2096,2117,5.
计算机与数字工程2017,Vol.45Issue(11):2093-2096,2117,5.DOI:10.3969/j.issn.1672-9722.2017.11.003

基于特征相关性选择的二硫键预测算法

Predicting Disulfide Connectivity Based on Correlation Coefficients Selection

刘坤1

作者信息

  • 1. 南京理工大学计算机科学与工程学院 南京 210094
  • 折叠

摘要

Abstract

Disulfide connectivity is one of significant protein structural characteristic. Previous prediction methods usually used support vector regression,which didn 't consider the correlation between different features. According to traditional prediction methods,based on fisher score,this paper calculated correlation coefficient of each pair of features after feature selection,then de-leted the features with high correlation coefficient. Based on the rest features,support vector regression was used to train model and test. 4-fold validation was used on our benchmark dataset to gain a hopeful result comparing with previous results.

关键词

生物信息学/二硫键/支持向量回归/相关系数/特征选择

Key words

bioinformatics/disulfide bond/support vector regression/correlation coefficient/feature selection

分类

信息技术与安全科学

引用本文复制引用

刘坤..基于特征相关性选择的二硫键预测算法[J].计算机与数字工程,2017,45(11):2093-2096,2117,5.

基金项目

国家自然科学基金项目(编号:61373062,61371040)资助. (编号:61373062,61371040)

计算机与数字工程

OACSTPCD

1672-9722

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