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基于概念密度泛函理论磷酸酯类反应性物质毒性预测

丁晓琴 丁俊杰 李大禹 潘里 裴承新

物理化学学报2018,Vol.34Issue(3):314-322,9.
物理化学学报2018,Vol.34Issue(3):314-322,9.DOI:10.3866/PKU.WHXB201709042

基于概念密度泛函理论磷酸酯类反应性物质毒性预测

Toxicity Prediction of Organoph Osphorus Chemical Reactivity Compounds Based on Conceptual DFT

丁晓琴 1丁俊杰 1李大禹 1潘里 1裴承新2

作者信息

  • 1. 北京药物化学研究所,北京102205
  • 2. 国民核生化灾害防护国家重点实验室,北京102205
  • 折叠

摘要

Abstract

Following the exceptional success of density functional theory (DFT) in the realm of quantum chemistry,the conceptual DFT (CDFT) method has been widely used for describing the dynamic reactivity index of reactive chemicals in recent years.Reactive chemicals refer to those that bind covalently to biological macromolecules;in other words,the binding of the ligand with the receptor or enzyme involved with the breakage of the old bond and the process of formation of the new bond.Organophosphorus AChE irreversible inhibitors are reactive chemicals.In the present work,we calculated the reactivity descriptors for AChE irreversible inhibitors (organophosphate compounds),including some pesticides and chemical warfare agents,by the CDFT method at the B3LYP/6-311++G(2d,3p)/gas,B3LYP/6-311 ++G(2d,3p)/CPCM/water,MP2/6-31 1++G(2d,3p)/gas,MP2/6-311 ++G(2d,3p)/CPCM/water levels,in order to analyze their reactivity and determine the optimal parameters for calculation.Reactivity descriptors such as chemical potential (μ),vertical ionization energy (/),vertical electronic affinity (A),molecular absolute hardness (rη),electrophilicity (ω),condensed atomic Fukui function,and varied natural bond orbital (NBO) bond order,were used to identify changes in the reactivity of these compounds in the gas and aqueous phases with the conductor-like polarizable continuum model (CPCM) model.The values of the reactivity descriptors and quantitative structure-property relationship (QSPR) models indicated that:the center of the phosphor atom (P) was the nucleophilic reaction site with AChE for most of selected compounds;substituted tertiaryamine protonization in organophosphorus compounds greatly enhanced the electrophilic attackingability of the P reaction center;and as a whole,conformation did not have a significant effect on the reactivity for theDFT/B3LYP method,with an exception for the MP2 method which showed a comparative instability in results.The initial QSPR model in training sets of pLD50 with stepwise regression analysis shows that the B3LYP/6-311++G(2d,3p)/gas level can provide a better result than the MP2 level and in the water phase,and provides a good representation of the molecular structure-toxicity relationship.These predictions for the compounds surpass those obtained by conventional QSPR equations,which do not consider electron transfer in the phosphorylated or aged process,thereby providing unreliable predictions.The proposed reactivity concept using the CDFT principle possesses a definite physical meaning,reflects the dynamic reactivity from the ground state of the molecular structure,and can be applied to toxicity predictions for AChE irreversible inhibitors with greater precision and stability.

关键词

概念密度泛函理论/反应性指数/有机磷酸酯类/乙酰胆碱酯酶不可逆抑制剂/定量构性关系

Key words

CDFT/Reactivity descriptors/Organophosphate/AChE irreversible inhibitors/QSPR

分类

化学化工

引用本文复制引用

丁晓琴,丁俊杰,李大禹,潘里,裴承新..基于概念密度泛函理论磷酸酯类反应性物质毒性预测[J].物理化学学报,2018,34(3):314-322,9.

物理化学学报

OA北大核心CSCDCSTPCDSCI

1000-6818

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