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斑点叉尾鮰病毒焦磷酸测序检测方法的建立

王娜 张旻 景宏丽 江育林 吴绍强

畜牧与兽医2018,Vol.50Issue(5):89-92,4.
畜牧与兽医2018,Vol.50Issue(5):89-92,4.

斑点叉尾鮰病毒焦磷酸测序检测方法的建立

Establishment of pyrosequencing assay for detection of channel catfish virus

王娜 1张旻 1景宏丽 1江育林 1吴绍强1

作者信息

  • 1. 中国检验检疫科学研究院,北京100176
  • 折叠

摘要

Abstract

The aim of the study was to establish a pyrosequencing assay for rapid detection and identification of channel catfish virus (CCV).The amplification primers and sequencing primer were designed for the conserved region of protein kinase gene of CCV.After PCR reaction,the product was detected with pyrosequencing and identified by genomic alignment.The pyrosequencing assay was established of the PK gene for CCV by optimizing the reaction conditions and system.The results showed that the PCR product was 144bp and it could specifically identify the target viruses.The minimum detection limit of the nuclei acid was 5× 10-6ng/μL Pyrosequencing repeated three times accurately determined the nucleotide sequence to be 45bp long.It was demonstrated that the pyrosequencing assay established here possessed good specificity,high sensitivity and stability in detection of CCV,The assay is applicable to r high throughput and time-consuming detection of CCV.It takes only 4 h.

关键词

斑点叉尾鮰病毒/焦磷酸测序/PCR/蛋白激酶基因/检测

Key words

channel catfish virus/pyrosequencing/PCR/protein kinase gene/detection

分类

农业科技

引用本文复制引用

王娜,张旻,景宏丽,江育林,吴绍强..斑点叉尾鮰病毒焦磷酸测序检测方法的建立[J].畜牧与兽医,2018,50(5):89-92,4.

基金项目

国家“十二·五”科技支撑计划(2013BAD12B02) (2013BAD12B02)

畜牧与兽医

OA北大核心CSTPCD

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