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加勒比松种源苗期DNA甲基化多样性分析

李义良 黄梓培 赵奋成 郭文冰 吴惠姗 廖仿炎

热带亚热带植物学报2018,Vol.26Issue(3):224-232,9.
热带亚热带植物学报2018,Vol.26Issue(3):224-232,9.DOI:10.11926/jtsb.3825

加勒比松种源苗期DNA甲基化多样性分析

Analysis of DNA Methylation Diversity among Provenances of Piuns caribaea Morelet Seedlings

李义良 1黄梓培 2赵奋成 1郭文冰 1吴惠姗 1廖仿炎1

作者信息

  • 1. 广东省森林培育与保护利用重点实验室, 广东省林业科学研究院,广州510520
  • 2. 广东药科大学,广州 510006
  • 折叠

摘要

Abstract

In order to understand the genetic diversity of Piuns caribaea Morelet,the methylation diversity among 17 provenances to 3 varieties of P. caribaea was studied by using methylation sensitive amplification polymorphism (MSAP) technique. The results showed that a total of 425 bands were amplified by 56 pairs of primer combinations, 422 of them were polymorphic with a polymorphism rate of 99.25%. The major DNA methylation type in P.caribaea was hemi-methylation.The average methylation rate of P.caribaea var.caribaea, var.hondurensis and var.bahmaensis was 22.39%, 22.29% and 22.35%, respectively, which had no significant difference. The genetic diversity of DNA sequences (H=0.4376) was significantly higher than that of DNA methylation (H=0.3274). The Mantel test showed that there was no relation between genome genetic variation and methylation epigenetic variation (r=-0.171, P=0.16). The genetic cluster result was very different from that of methylation,although the two clustering results could not divided the three varieties of P.caribaea.So,it was suggested that P.caribaea had a high epigenetic diversity,which could provide excellent germplasm resources for genetic improvement of P.caribaea.

关键词

加勒比松/种源/DNA甲基化/表观多样性

Key words

Pinus caribaea/Provenance/DNA methylation/Epigenetic diversity

引用本文复制引用

李义良,黄梓培,赵奋成,郭文冰,吴惠姗,廖仿炎..加勒比松种源苗期DNA甲基化多样性分析[J].热带亚热带植物学报,2018,26(3):224-232,9.

基金项目

国家林业局948项目(2013-4-39)资助 This work was supported by the 948 Project of State Forestry Bureau(Grant No.2013-4-39). (2013-4-39)

热带亚热带植物学报

OA北大核心CSCDCSTPCD

1005-3395

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