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实验用狨猴微卫星引物筛选及遗传多样性分析

滕永康 刘先菊 张旭 向志光 阮研硕 肖冲 刘云波

中国比较医学杂志2018,Vol.28Issue(6):15-20,28,7.
中国比较医学杂志2018,Vol.28Issue(6):15-20,28,7.DOI:10.3969/j.issn.1671-7856.2018.06.004

实验用狨猴微卫星引物筛选及遗传多样性分析

Microsatellite marker design and genetic analysis for the common marmoset

滕永康 1刘先菊 1张旭 1向志光 1阮研硕 1肖冲 1刘云波1

作者信息

  • 1. 中国医学科学院医学实验动物研究所,北京 100021
  • 折叠

摘要

Abstract

Objective To screen and optimize the microsatellite DNA primers of the laboratory common marmoset, analyze and evaluate the population genetic quality for the marmosets (Callithrix jacchus) introduced into the Institute of Medical Laboratory Animal science, Chinese Academy of Medical Sciences. Methods A total of 30 marmosets were randomly chosen, and their genome DNA from blood was extracted using phenol/chloroform method. The microsatellite DNA was amplified using standard polymerase chain reaction (PCR). The amplification products were tested by STR scanning after 2% agrose gel and 8% PAGE electrophoresis. The data processing and genetic analysis were completed using the Popgene1. 32 software. Results A total of 20 pairs of microsatellite loci showed genetic polymorphism, and 147 alleles were detected. The number of allele was 5 to 10, average 7. 35. The effective allele was 2. 2500 to 6. 3830, average 4. 0402. The observed heterozygosity was 0. 000 to 0. 4667, average 0. 1533. The expected heterozygosity was 0. 1424 to 0. 4350, average 0. 2506. The Shannon diversity index was 1. 2242 to 2. 0324, average 1. 5949. The polymorphic information content was 0. 5366 to 0. 8254, average 0. 7053. Conclusions The 20 pairs of marmoset microsatellite primers are genetically highly diverse and are in a Hardy-Weinberg equilibrium.

关键词

实验用狨猴/微卫星DNA/遗传多样性

Key words

marmoset/microsatellite DNA/genetic diversity

分类

医药卫生

引用本文复制引用

滕永康,刘先菊,张旭,向志光,阮研硕,肖冲,刘云波..实验用狨猴微卫星引物筛选及遗传多样性分析[J].中国比较医学杂志,2018,28(6):15-20,28,7.

基金项目

国家重点研发计划(2017YFA0105201) (2017YFA0105201)

北京市科技计划(Z161100000216154). (Z161100000216154)

中国比较医学杂志

OA北大核心CSTPCD

1671-7856

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