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The GATK joint genotyping workflow is appropriate for calling variants in RNA-seq experiments

Jean-Simon Brouard Flavio Schenkel Andrew Marete Nathalie Bissonnette

畜牧与生物技术杂志(英文版)2019，Vol.10Issue(3)：811-816,6.

The GATK joint genotyping workflow is appropriate for calling variants in RNA-seq experiments

Jean-Simon Brouard ¹Flavio Schenkel ²Andrew Marete ¹Nathalie Bissonnette¹

作者信息

1. Sherbrooke Research and Development Centre,Agriculture and Agri-Food Canada,Sherbrooke,QC J1M 0C8,Canada
2. Center of Genetic Improvement of Livestock,University of Guelph,Guelph,ON N1G 2W1,Canada
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摘要

关键词

GATK/GVCF/Joint genotyping/RNA-seq/SNP

Key words

GATK/GVCF/Joint genotyping/RNA-seq/SNP

引用本文复制引用

Jean-Simon Brouard,Flavio Schenkel,Andrew Marete,Nathalie Bissonnette..The GATK joint genotyping workflow is appropriate for calling variants in RNA-seq experiments[J].畜牧与生物技术杂志(英文版),2019,10(3):811-816,6.

基金项目

This study was funded by Agri-Food and Agriculture Canada (Project AAFCJ0000-75). （Project AAFCJ0000-75）

畜牧与生物技术杂志(英文版)

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ISSN：1674-9782

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