不同更新方式下亚热带森林土壤病毒群落结构与功能特征OACSTPCD
Structural and Functional Characteristics of Soil Virus Communities Under Different Restoration Patterns in Subtropical Forests
探讨不同更新方式下森林土壤病毒群落特征及其在生物地球化学循环中作用,以福建上杭白砂国有林场的杉木人工林、天然更新次生林和原生林土壤为研究对象,结合宏病毒组学和生物信息学方法进行病毒群落结构与功能分析.结果表明:森林更新方式对土壤病毒群落结构产生了明显的影响.原生林和天然更新次生林主要病毒类群为长尾噬菌体科(Siphoviridae)(62.60%、31.49%),而杉木人工林主要土壤病毒类群为微小噬菌体科(Microviridae)(27.89%).在 3 种土壤中均发现了核质巨大DNA病毒(nucleo-cy-toplasmic large DNA viruses,NCLDV),其在天然更新次生林中占比最高(20.83%);杉木人工林和天然更新次生林中最主要的病毒宿主属于变形菌门(Proteobacteria),而原生林则为放线菌门(Actinobacteria).但 3 种森林类型土壤病毒宿主均包括戈登氏菌(Gordonia)、红球菌(Rhodococcus)、分枝杆菌(Mycolicibacterium)等感染人和动物的致病菌;病毒功能组中均检测到丰富的辅助碳水化合物活性酶(CAZyme)基因,其中杉木人工林土壤病毒中编码CAZymes的基因丰度(4 个)显著低于原生林(210 个)和天然更新次生林(69 个).研究结果揭示了森林更新方式对土壤病毒结构、宿主和碳循环功能的潜在影响.
This study aimed to explore the characteristics of soil viral communities and their roles in biogeochemical cycling under different forest restoration patterns.Viral metagenomics and bioinformatics methods were employed to examine the composition and functionality of viral commu-nities in a Chinese fir plantation,a natural regeneration forest,and a primeval forest.The results showed that the mode of forest regeneration had a significant impact on the structure of the soil viral community.Siphoviridae demonstrated prevalence in the naturally regenerating and primeval forests(62.60%and 31.49%,respectively),while the Microviridae were observed to be the most abundant in the fir plantation(27.89%).The prevalence of nucleo-cytoplasmic large DNA viruses in the examined soils was highest in the natural regeneration forest(20.83%).Proteobacteria were the dominant viral host in the fir plantation and natural regeneration forest,whereas Actinobacteria were prevalent in the primeval forest.Soil viral hosts in the three forest types commonly include pathogenic bacteria that can infect humans and animals,such as Gordonia,Rhodococcus,and Mycolicibacterium.Rich auxiliary carbohydrate-active enzyme(CAZyme)genes were detected in the functional groups of viromes.The number of genes encoding CAZymes in soil viruses of fir planta-tions(4)was significantly lower compared to primary forests(210)and natural regeneration forests(69).These findings reveal the potential impact of forest renewal patterns on soil viral structure,hosts,and carbon cycle function.
林秋沙;严雨亭;袁程昱;李帅军;贺纪正;于丹婷
福建师范大学地理科学学院,福建 福州 350117福建师范大学湿润亚热带山地生态国家重点实验室培育基地,福建 福州 350117
农业科学
森林恢复宏病毒组群落结构辅助碳水化合物活性酶基因
forest restorationviromecommunity structureauxiliary carbohydrate-active enzyme genes
《福建师范大学学报(自然科学版)》 2024 (001)
60-68 / 9
国家自然科学基金青年科学基金项目(4190070688)
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