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基于RNA-Seq技术初步探索顺铂在口腔鳞状细胞癌的相关耐药机制

张万林 李一村 杨宏宇

遵义医科大学学报2024,Vol.47Issue(1):53-61,9.
遵义医科大学学报2024,Vol.47Issue(1):53-61,9.

基于RNA-Seq技术初步探索顺铂在口腔鳞状细胞癌的相关耐药机制

Investigating cisplatin drug resistance mechanisms in oral squamous cells carcinoma through RNA-Seq technology:a preliminary study

张万林 1李一村 2杨宏宇3

作者信息

  • 1. 遵义医科大学口腔医学院,贵州遵义 563099
  • 2. 北京大学深圳医院口腔医学中心,口腔颌面外科,广东深圳 518036
  • 3. 遵义医科大学口腔医学院,贵州遵义 563099||北京大学深圳医院口腔医学中心,口腔颌面外科,广东深圳 518036
  • 折叠

摘要

Abstract

Objective Investigating the genes and signaling pathways related to cisplatin chemoresistance in oral squamous cell carcinoma(OSCC).Methods We established an in vitro model of cisplatin-induced resistance in an OSCC cell line.Using RNA sequencing,we compared the transcriptomic difference of cisplatin-resistant(HN6-R)and sensitive(HN6-WT_Control)cell lines.Differential expression analysis was conducted to identify key genes and pathways involved in chemoresistance.Gene set enrichment analysis(GSEA)was utilized to fur-ther elucidate the biological significance of these changes.Results Transcriptomic analysis revealed 216 differen-tially expressed genes(DEGs)in HN6-R cells,including 55 downregulated and 161 upregulated genes,relative to HN6-WT_Control cells(log2Fold Change>1;adjusted P value<0.05).GSEA analysis identified several critical pathways associated with chemoresistance,notably the IL6/JAK2/STAT3,TNF-α and NF-κB,and vari-ous immune response pathways.Prominent among the altered genes were CXCL10,CXCL11,NR4A3,and IG-FBP3.Conclusion Our findings highlight the upregulation of IL6/JAK2/STAT3 and other immune-related path-ways in cisplatin-resistant OSCC cells,suggesting their potential as biomarkers for chemotherapy response and as therapeutic targets.This study provides new insights into the molecular mechanisms of cisplatin resistance in OS-CC,offering a foundation for future research and therapeutic development.

关键词

口腔鳞癌/顺铂/化疗/耐药/差异基因/生物信息学

Key words

oral squamous cell carcinoma/cisplatin/chemotherapy/drug resistance/differentially expressed genes/bioinformatics

分类

医药卫生

引用本文复制引用

张万林,李一村,杨宏宇..基于RNA-Seq技术初步探索顺铂在口腔鳞状细胞癌的相关耐药机制[J].遵义医科大学学报,2024,47(1):53-61,9.

基金项目

深圳市科技创新委员会基础研究重点项目(NO:JCYJ20220818102816036). (NO:JCYJ20220818102816036)

遵义医科大学学报

OACSTPCD

2096-8159

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