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基于CRISPR/Cas技术的传染性病原精准便携化检测系统OA北大核心CSTPCD

A Precise and Portable Detection System for Infectious Pathogens Based on CRISPR/Cas Technology

中文摘要英文摘要

以核酸为检测靶向的分子诊断方法是传染性病原体检测的金标准,但将其应用于便携化或现场快速诊断时仍存在多种限制和挑战,如特异性差、操作繁琐和便携化难等.规律间隔成簇短回文重复序列(CRISPR)/CRISPR相关蛋白(Cas)-荧光检测方法有望大幅提升核酸识别的特异性和信噪比.本研究开发了环介导等温扩增(LAMP)-CRISPR/Cas-便携化灰度读取仪检测系统.在CRISPR RNA(crRNA)存在下,利用CRISPR/Cas12a体系实现了对自主设计的甲型和乙型流感病毒核酸LAMP扩增反应体系的精准荧光检测,验证了CRISPR/Cas体系的高选择性和通用性.配套自主开发的便携化灰度读取仪,可同时实现荧光信号的低成本采集和高可靠性可视化判读,检测结束后直接输出样品的阳/阴性结果.利用本检测系统对实际样本进行了分析,验证了其可靠性和实用性,证明了本系统能够实现流感病毒的高灵敏、高特异性便携化分析.

Nucleic acid-based molecular diagnostic methods are considered the gold standard for detecting infectious pathogens.However,when applied to portable or on-site rapid diagnostics,they still face various limitations and challenges,such as poor specificity,cumbersome operation,and portability difficulties.The CRISPR(Clustered regularly interspaced short palindromic repeats)/CRISPR-associated protein(Cas)-fluorescence detection method holds the potential to significantly enhance the specificity and signal-to-noise ratio of nucleic acid detection.In this study,we developed a portable grayscale reader detection system based on loop-mediated isothermal amplification(LAMP)-CRISPR/Cas.On one hand,in the presence of CRISPR RNA(crRNA),the CRISPR/Cas12a system was employed to achieve precise fluorescent detection of self-designed LAMP amplification reactions for influenza A and influenza B viruses.This further validated the high selectivity and versatility of the CRISPR/Cas system.On the other hand,the accompanying independently developed portable grayscale reader allowed for low-cost collection of fluorescence signals and high-reliability visual interpretation.At the end of the detection process,it directly provided positive or negative results.Practical sample analyses using this detection system have verified its reliability and utility,demonstrating that this system can achieve highly sensitive and highly specific portable analysis of influenza viruses.

刘一辰;赵茹健;吕佰阳;宋德锋;唐艺丹;姜艳芳;李冰凌

中国科学技术大学应用化学与工程学院,合肥 230026||中国科学院长春应用化学研究所,电分析化学国家重点实验室,长春 130022中国科学院长春应用化学研究所,电分析化学国家重点实验室,长春 130022吉林大学中日联谊医院普通外科,长春 130021吉林大学第一医院基因诊断中心,长春 130021

等温扩增CRISPR-Cas荧光便携化检测流行性病原灰度读取仪

Isothermal amplificationCRISPR-CasFluorescencePortable detectionInfectious pathogensGrayscale reader

《分析化学》 2024 (002)

基于新型核糖开关的免标记、便携式基因检测新方法

187-197 / 11

国家自然科学基金项目(No.22004118)和吉林省科技发展计划重点研发项目(No.20230203193SF)资助.Supported by the National Natural Science Foundation of China(No.22004118)and the Key Research and Development Program of Science and Technology Development Plan of Jilin Province,China(No.20230203193SF).

10.19756/j.issn.0253-3820.231382

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