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基于图数据增强的疾病与基因关联挖掘

贾祥虎 吴舜尧

青岛大学学报(自然科学版)2024,Vol.37Issue(1):20-26,7.
青岛大学学报(自然科学版)2024,Vol.37Issue(1):20-26,7.DOI:10.3969/j.issn.1006-1037.2024.01.04

基于图数据增强的疾病与基因关联挖掘

Disease and Gene Association Mining Based on Graph Data Enhancement

贾祥虎 1吴舜尧1

作者信息

  • 1. 青岛大学计算机科学技术学院,青岛 266071
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摘要

Abstract

In view of the incompleteness of existing association data and the inadequacy of multi-source omics data,computational indexes based on three-hop local topological similarity were designed to identify biologically significant but unmapped Protein-Protein Interactions(PPI).A novel graph neural network method(GDaEPred)based on graph data enhancement was proposed for mining disease-gene associations.Experimental results showed that the average accuracy of GDaEPred was improved by 4.1%,and the pre-cision,recall and F1 score were also improved.

关键词

图神经网络/图数据增强/致病基因预测

Key words

graph neural networks/graph data enhancement/disease gene prediction

分类

信息技术与安全科学

引用本文复制引用

贾祥虎,吴舜尧..基于图数据增强的疾病与基因关联挖掘[J].青岛大学学报(自然科学版),2024,37(1):20-26,7.

基金项目

山东省自然科学基金(批准号:ZR2019PF012)资助 (批准号:ZR2019PF012)

山东省高等学校科技计划项目(批准号:J18KA356)资助. (批准号:J18KA356)

青岛大学学报(自然科学版)

1006-1037

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