农学学报2024，Vol.14Issue(4)：26-36,11.
全基因组关联分析在玉米籽粒性状研究中的应用及其候选基因预测
Grain-related Traits in Maize:Genome-wide Association Analysis and Candidate Gene Prediction
摘要
Abstract
To explore the natural variations in regulating the maize kernel development and to assist in the genetic improvement of maize yield traits,in this study,150 maize inbred lines with rich genetic variations were selected as materials for investigation.Combining 34,342 SNP markers and three models,a genome-wide association analysis was conducted on five grain-related traits.The results revealed that a total of 18 independent loci were significantly associated with the target traits,with each locus accounting for 12.24%to 15.41%of the phenotypic variations.Additionally,significant epistatic interactions were identified among four pairs of SNPs associated with kernel length,collectively explaining 5.32%of the phenotypic variations.By integrating the dynamic transcriptome data of kernel development in the B73 inbred line and functional annotations of genes,19 candidate genes were predicted and classified into four categories:6 enzymes,3 ribosomal proteins,1 transcription factor,and 9 other proteins.These candidate genes provide new genetic resources for deciphering the molecular mechanisms of maize kernel development and enhancing maize kernel size and yield.Through this research,we have not only uncovered the natural variations that regulate the development of corn kernels but also provided new genetic resources for the genetic improvement of corn yield traits.These findings are expected to bring new breakthroughs in corn breeding efforts,enhance corn production,and thereby better meet human needs for food.关键词
玉米/籽粒大小/产量/全基因组关联分析/候选基因预测Key words
maize/kernel size/yield/genome-wide association analysis/candidate genes prediction分类
农业科技引用本文复制引用
陈昕怡,刘晨艳,华明珠,徐欣,冯汶祥,汪保华,方辉..全基因组关联分析在玉米籽粒性状研究中的应用及其候选基因预测[J].农学学报,2024,14(4):26-36,11.基金项目
国家自然科学基金项目"玉米籽粒油份基因ZmCtBP1的分子遗传机制研究"(32101730) （32101730）
南通大学大学生创新训练计划项目"玉米籽粒发育基因ZmPPR6的克隆及功能分析"(2022098). （2022098）
