禽腺病毒血清4型Hexon蛋白的转录组学功能分析OA北大核心CSTPCD
Transcriptome Functional Analysis of Hexon Protein of Fowl Adenovirus Serotype 4
禽腺病毒血清4型(FAdV-4)是引起禽肝炎-心包积液综合征的重要病原,严重危害我国养禽业的发展.研究表明,FAdV-4六邻体(Hexon)蛋白是决定病毒毒力和致病性的重要因素之一.为了进一步探究Hexon蛋白在FAdV-4感染中的重要作用,本试验以鸡肝癌细胞(LMH)为研究模型,利用转录组测序技术对外源表达Hexon所诱导的差异表达基因进行筛选.结果显示,与对照组相比,外源表达Hexon试验组共筛选到445个差异基因表达上调,36个差异基因表达下调.其中,BAG3、JUN、IL8L1、CCL4和THBS1等基因之前已被报道与FAdV-4感染相关,但HSPB9、HSP90AA1、HSPA8、HSPA2、DCN、ELOVL3和SBK2等基因在FAdV-4感染中的作用还未被揭示.GO富集分析结果显示,下调的差异基因主要与早期内体和蛋白酶体附属复合体相关,而上调的差异基因主要与质膜、细胞外表面区域和超分子纤维相关.KEGG通路富集分析结果显示,差异表达基因主要富集在MAPK、Wnt和VEGF等信号通路.此外,通过蛋白质相互作用网络分析发现,HSP90AA1、HSPA8、JUN和DCN等多个关键蛋白位于整个网络中心且已被报道与多种病毒复制密切相关.综上所述,本研究通过转录组测序筛选出一系列由外源表达Hexon诱导的差异表达基因,为控制FAdV-4感染提供了新的靶点和理论依据.
Fowl adenovirus serotype 4(FAdV-4)is an important pathogen causing avian hepatitis and pericardial effusion syndrome,which seriously endangers the development of poultry industry in our country.Current evidence has suggested that the FAdV-4 Hexon protein was one of the important components determining viral virulence and pathogenicity.In order to further explore the critical role of Hexon protein in FAdV-4 infection,this study selected Leghorn male hepatocellular(LMH)cells as research model,and transcriptomic sequencing technology was used to screen the differentially expressed genes induced by Hexon overexpression.The results showed that compared with the control group,445 differentially expressed genes were up-regulated and 36 differentially expressed genes were down-regulated.Among them,BAG3,JUN,IL8L1,CCL4 and THBS1 genes have previously been described to be associated with FAdV-4 infection,while the functions of HSPB9,HSP90AA1,HSPA8,HSPA2,DCN,ELOVL3,and SBK2 genes in FadV-4 infection have not been reported.GO enrichment analysis showed that down-regulated differential genes were mainly related to early endosome and proteasomal accessory complexes,while up-regulated differential genes were mainly related to plasma membrane and extracellular surface regions and supramolecular fibers.KEGG pathway enrichment analysis showed that differentially expressed genes were mainly enriched in MAPK,Wnt,VEGF and other signaling pathways.In addition,several key proteins such as HSP90AA1,HSPA8,JUN,and DCN were found to be positioned at the center of the whole network by protein-protein interaction(PPI)network analysis and have been described to be closely involved in viral replication.In summary,our study revealed a series of differentially expressed genes induced by Hexon overexpression through RNA sequencing,which may provide new targets and theoretical basis for controlling FAdV-4 infection.
冯慧霞;刘梦渊;王晨阳;李炜;孙子龙;席义博;张鼎;杨勃
山西农业大学动物医学学院,山西 太谷 030801山西医科大学管理学院,山西 榆次 030620
禽腺病毒血清4型六邻体蛋白鸡肝癌细胞转录组测序
Fowl adenovirus serotype 4HexonLMH cellsRNA sequencing
《核农学报》 2024 (007)
1281-1290 / 10
山西省回国留学人员科研资助项目(2023-094)
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