花生学报2024，Vol.53Issue(2)：1-9,9.DOI:10.14001/j.issn.1002-4093.2024.02.001
基于全基因组水平的花生FAR1转录因子家族分析
Genome-Wide Analysis of the FAR1 Gene Family in Peanut
摘要
Abstract
FAR1,a class of transcription factors derived from mutator-like transposases,plays an impor-tant role in the phytochrome A signaling pathway.Genome-wide analysis of FAR1 is helpful to understand the molecular mechanism of the FAR1 family in development and in response to abiotic stress pathways in peanut.60 FAR1 genes were identified in peanut.The genes were divided into three groups by phylogenetic analysis.21,20 and 19 proteins were classed intoⅠ,ⅡandⅢgroups.The Ka/Ks ratio of 65% orthologs was less than 0.5,which indicated that these genes were structurally stable and conserved,and experienced strong negative selection.Using online published transcriptome data,it was found that the majority of FAR1 genes were mostly expressed in the leaf.The results provide a foundation for future studies of the functions and regulatory mechanisms of FAR1 family members.关键词
花生/FAR1转录因子/生物信息学Key words
peanut/FAR1 transcription factors/bioinformatics分类
农业科学引用本文复制引用
赵小波,李春娟,孙全喜,王奇,牟艺菲,王娟,苑翠玲,姜常松,单世华..基于全基因组水平的花生FAR1转录因子家族分析[J].花生学报,2024,53(2):1-9,9.基金项目
国家重点研发计划(2022YFD1000105,2022YFD1200403) （2022YFD1000105,2022YFD1200403）
山东省现代农业产业技术体系(SDAIT-04-01) （SDAIT-04-01）
山东省农业科学院创新工程(CXGC2023A06) （CXGC2023A06）
山东省农业良种工程(2020LZGC001) （2020LZGC001）
山东省自然科学基金项目(ZR2023QC057) （ZR2023QC057）
青岛市自然科学基金青年项目(23-2-1-44-zyyd-jch) （23-2-1-44-zyyd-jch）
