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首页|期刊导航|安徽医科大学学报|Cuproptosis基因和特征基因预测急性髓系白血病预后、免疫和肿瘤微环境的价值

Cuproptosis基因和特征基因预测急性髓系白血病预后、免疫和肿瘤微环境的价值OA北大核心CSTPCD

Value of Cuproptosis genes and characteristic genes in predicting prognosis,immunity and tumor microenvironment in acute myeloid leukemia

中文摘要英文摘要

目的 筛选急性髓系白血病(AML)中的差异预后Cuproptosis基因和特征基因并探索其在AML中的预后情况以及在免疫和肿瘤微环境中的生物学作用和相关性.方法 利用从TCGA、GEO和UCSC 3个主要数据库下载的AML临床、转录组、基因组和拷贝数数据,并从已发表的研究中收集Cuproptosis基因,从多组学的角度,通过各种生物信息学方法、Meta分析和二次分型,研究Cuproptosis基因和特征基因在生存、免疫、肿瘤微环境、干细胞相关性和药物敏感性等方面作用.结果 1个Cuproptosis基因被鉴定为AML的差异预后基因和5个通过影响Cuproptosis进而影响AML患者预后的特征基因,并建立了预后模型.差异基因主要富集于线粒体活性、氧化还原酶和能量代谢.在免疫方面,巨噬细胞MO、中性粒细胞、活化记忆CD4 T细胞和Tregs与风险评分呈正相关,巨噬细胞M2、静息肥大细胞、辅助滤泡T细胞和记忆B细胞与风险评分呈负相关;在肿瘤微环境方面,低危组的免疫细胞评分低于高危组,并且在总评分中,低危组的肿瘤微环境得分同样低于高危组,说明高危组的肿瘤纯度低于低危组;然而,干细胞在高风险和低风险组之间没有显著相关性,共有14种药物对治疗AML敏感.结论 通过构建AML预后模型,显示AML中的差异预后Cuproptosis基因和特征基因与免疫和肿瘤微环境密切相关.

Objective To screen Cuproptosis genes and characteristic genes for differential prognosis in acute mye-loid leukemia(AML)and explore their prognosis in AML as well as their biological roles and correlations in the immune and tumor microenvironment.Methods AML clinical,transcriptome,genomic,and copy number data were downloaded from three major databases,TCGA,GEO,and UCSC,and Cuproptosis genes were collected from published studies.From the perspective of multiomics,the effects of Cuproptosis gene and characteristic gene on survival,immunity,tumor microenvironment,stem cell correlation and drug sensitivity were studied by various bioinformatics methods,meta-analysis and secondary typing.Results One Cuproptosis gene was identified as a differential prognostic gene in AML and five characteristic genes were identified as influencing the prognosis of AML patients by influencing Cuproptosis,and a prognostic model was established.The differential genes were mainly concentrated in mitochondrial activity,REDOX enzyme and energy metabolism.In terms of immunity,macrophage M0,neutrophils,activated memory CD4 T cells and Tregs were positively correlated with risk score,while macro-phage M2,resting mast cells,immature CD4 T cells,helper follicular T cells and memory B cells were negatively correlated with risk score.In terms of tumor microenvironment,the immune cell score of the low-risk group was lower than that of the high-risk group,and in the total score,the tumor microenvironment score of the low-risk group was also lower than that of the high-risk group,indicating that the tumor purity of the high-risk group was lower than that of the low-risk group.However,there was no significant association between stem cells in the high-risk and low-risk groups,and a total of 14 drugs were found to be sensitive to treat AML.Conclusion Cuproptosis gene and characteristic gene are closely related to immune and tumor microenvironment in AML by constructing a prognostic model of AML.

李寅臻;农卫霞;张眉;芮东升;雷伟;摆文丽;李瑞;张亚洲;王奎

石河子大学医学院预防医学系,石河子 832000石河子大学第一附属医院风湿血液科,石河子 832000

临床医学

Cuproptosis急性髓系白血病差异基因免疫浸润肿瘤微环境

Cuproptosisacute myeloid leukemiadifferential geneimmune infiltrationtumor microenvironment

《安徽医科大学学报》 2024 (006)

1013-1022 / 10

国家自然科学基金(编号:81860374)

10.19405/j.cnki.issn1000-1492.2024.06.016

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