无患子雄性不育品种'琦蕊'不同发育时期雄花转录组分析OA北大核心CSTPCD
Transcriptome Sequencing of Male Sterile Buds at Different Developmental Stages in Sapindus mukorossi'Qirui'
[目的]探究无患子(Sapindus mukorossi Gaertn.)雄性不育品种'琦蕊'雄花不同发育时期的细胞学特征及差异表达基因,为深入解析无患子雄性不育发生的分子机制提供理论依据.[方法]在观察雄花花药不同发育过程的细胞学特点基础上,进一步利用RNA-Seq技术分别对小孢子母细胞时期(T1)、四分体时期(T2)、单核小孢子时期(T3)的雄花进行转录组比较分析,筛选关键差异表达基因.[结果]'琦蕊'绒毡层和内层细胞的持续膨大与增殖使得药室结构混乱,药室空间不足,最终导致无可育花粉产生.内源激素测定发现,茉莉酸水平在'琦蕊'雄花发育过程中呈下降趋势.3 个时期的转录组分析共筛选到 2 990 个差异表达基因(differentially expressed genes,DEGs),其中T2_vs_T1 中 722 个(516 个上调,206 个下调),T3_vs_T2 中 1 741 个(765个上调,976 个下调).GO和KEGG分析表明,这些DEGs主要富集在代谢过程、细胞分裂、花粉壁合成、激素信号转导等方面,共鉴定到 32 个花粉发育相关DEGs、27 个激素合成及信号转导DEGs.随机选取 9 个DEGs进行RT-qPCR分析,结果与RNA-Seq数据趋势一致,证明转录组数据的准确性.[结论]绒毡层细胞持续增殖和内层细胞延迟退化不断挤压小孢子是导致无患子'琦蕊'雄性不育发生的主要原因,物质代谢、细胞分裂、激素水平、花粉发育等相关基因在雄性不育发生过程中发挥重要作用.
[Objective]The objective of this work is to observe the cytological characteristics of the anther development in the male sterile Sapindus mukorossi'Qirui',identify differentially expressed genes(DEGs)during the critical period of anther development,which provides a theoretical basis for deeply analyzing the molecular mechanism of the male sterility.[Method]By examining the cytological features of male anther development stages,RNA-Seq technology was used to compare the transcriptome of male buds at different stages:microspore mother cell stage(T1),tetrad stage(T2)and mononuclear microspore stage(T3),to identify key DEGs.[Result]The study revealed that the continuous expansion and proliferation of'Qirui'tapetum and endothecium led to a chaotic anthecium structure and insufficient anthecium space,resulting in abortive pollen.Additionally,a decrease in the level of jasmonic acid(JA)from endogenous hormone determination was observed during male bud development.A total of 2 990 DEGs were detected through transcriptome analysis at the three anther development stages,of which 722 in T2_vs_T1(516 up-regulated and 206 down-regulated),and 1 741 in T3_vs_T2(765 up-regulated,976 down-regulated).GO and KEGG analysis showed that these DEGs were primarily enriched in metabolic processes,cell division,pollen wall synthesis,hormone signal transduction,etc.Specifically,32 DEGs were associated with pollen development,and 27 DEGs were linked to hormone synthesis and signal transduction.Nine DEGs were randomly selected for RT-qPCR analysis,and the results were consistent with the trend of RNA-Seq data,which proved the accuracy of transcriptome data.[Conclusion]The continuous proliferation of tapetum,delayed degeneration of endothecium,and continuous extrusion of microspores are the key factors leading to male sterility in S.mukorossi'Qirui'.Overall,genes related to material metabolism,cell division,hormone level and pollen development play crucial roles in the mechanism of male sterility.
廖杨梅;赵国春;翁学煌;贾黎明;陈仲
北京林业大学林学院 林木资源高效生产全国重点实验室 省部共建森林培育与保护教育部重点实验室 国家能源非粮生物质原料研发中心,北京 100083福建源华林业生物科技有限公司,三明 354500
无患子雄性不育转录组差异表达基因绒毡层细胞分裂茉莉酸
Sapindus mukorossi Gaertn.male sterilitytranscriptomedifferential expressed genes(DEGs)tapetumcell divisionjasmonic acid
《生物技术通报》 2024 (007)
197-206 / 10
国家自然科学基金项目(32371857),国家科技基础资源调查专项(2019FY100803)
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