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GIMAP7在肺腺癌组织中的表达及其临床意义的生物信息学研究OACSTPCD

Expression of GIMAP7 in lung adenocarcinoma tissue and its clinical significance:a bioinformatics study

中文摘要英文摘要

目的 探讨免疫相关蛋白GTP酶7(GIMAP7)蛋白在肺腺癌组织中的表达情况及其临床意义.方法 通过癌症基因组图谱(TCGA)数据库下载539例肺腺癌患者GIMAP7转录组数据及相关临床资料,根据GIMAP7表达水平分为高表达组270例和低表达组269例,比较两组患者总生存期、无进展间隔期.回顾性收集2021年6月至2022年6月在台州市第一人民医院行手术治疗并经病理检查确诊为肺腺癌20例患者的手术组织标本进行免疫组化染色,验证其GIMAP7表达水平.利用TIMER和ESTIMATES算法分析GIMAP7表达水平与免疫细胞浸润的关系,单基因富集分析(ssGSEA)法分析GIMAP7相关的信号通路.结果 TCGA数据库转录组学分析显示GIMAP7在肺腺癌组织中呈低表达(P<0.05).GIMAP7低表达组患者总生存期、无进展间隔期均短于高表达组(P<0.001、0.013).20例肺腺癌组织样本免疫组化结果表明85.00%(17/20)的患者GIMAP7在肺腺癌组织中呈低表达.GIMAP7的表达水平与CD4+T细胞、CD8+T细胞、B细胞、树突状细胞、巨噬细胞、中性核细胞丰度及ESTIMATES评分均相关(均P<0.001).ssGSEA结果显示,GIMAP7主要参与适应性免疫、白细胞介导的免疫反应和淋巴细胞介导的免疫、核小体组装等通路.结论 GIMAP7在肺腺癌中呈显著低表达,GIMAP7的表达水平与免疫细胞浸润相关,其有望成为肺腺癌免疫治疗的新型生物标志物.

Objective To investigate the expression of GTPase of immunity-associated proteins(GIMAP)7 in lung adenocarcinoma(LUAD)tissue and its clinical significance.Methods The GIMAP7 transcriptome data and relevant clinical data of 539 LUAD patients were downloaded from the TCGA database.Patients were divided into high-expression(n=270)and low-expression(n=269)groups according to GIMAP7 expression level,and the overall survival(OS)and progressionfree interval(PFI)of patients in the two groups were compared.The surgical tissue samples of 20 patients who underwent surgical treatment and were pathologically diagnosed as LUAD in Taizhou First People's Hospital from June 2021 to June 2022 were collected for immunohistochemical staining to verify the expression level of GIMAP7.The study used TIMER and ESTIMATES score to analyze the relationship between GIMAP7 expression level and immune cell infiltration,and performed single sample gene set enrichment analysis(ssGSEA)to enrich the signaling pathway of GIMAP7 in LUAD tissue.Results TCGA database transcriptomic analysis showed low expression of GIMAP7 in LUAD tissue(P<0.05).The OS and PFI of GIMAP7 low expression group were both shorter than those of high expression group(P<0.001,0.013,respectively).The immunohi-stochemistry staining results of tissues from 20 patients with LUAD showed low expression of GIMAP7 in 85.00%(17/20)cases.The expression level of GIMAP7 was significantly correlated with the abundance of CD4+T cells,CD8+T cells,B cells,dendritic cells,macrophage,neutrophil,and ESTIMATES score(all P<0.001).SsGSEA analysis showed that GIMAP7 was mainly involved in adaptive immunity,leukocyte-mediated immune responses,lymphocyte-mediated immunity,nucleosome assembly,and other pathways.Conclusion GIMAP7 is significantly low expressed in LUAD,and the expression level of GIMAP7 is significantly correlated with immune cell infiltration.It is expected to be a novel biomarker for immunotherapy of LUAD.

李安安;吴佳富;牟泠葳;张继琛;王斌梁;郑森中;陈巍

318020 台州市第一人民医院心胸外科温州医科大学第一临床医学院318020 台州市第一人民医院呼吸与危重症医学科

肺腺癌肿瘤微环境肿瘤免疫治疗免疫相关蛋白GTP酶7

Lung adenocarcinomaTumor microenvironmentTumor immunotherapyGTPase of immunity-associated proteins 7

《浙江医学》 2024 (013)

1387-1390,后插4-后插5 / 6

台州市社会发展科技计划项目(21ywa47)

10.12056/j.issn.1006-2785.2024.46.13.2024-252

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