牛RASGRF1基因的组织印记表达与分析OA北大核心CSTPCD
Tissue Imprinting Expression and Analysis of Bovine(Bos taurus)RASGRF1Gene
基因组印记是哺乳动物中的一种表观遗传学现象,其基因呈现亲本特异性的单等位基因表达.印记基因在胚胎发育以及胎盘的营养运输中发挥着重要作用.Ras蛋白特异性鸟苷酸释放因子1(Ras protein specific guanine nucleotide releasing factor 1,RASGRF1)基因编码140 kD的Ras特异性鸟嘌呤核苷酸释放因子,并且该基因与动物幼年时期的生长发育性状相关.Rasgrf1基因在小鼠(Mus musculus)中是父源印记基因,而在牛(Bos taurus)中的印记状态尚未研究.为研究RASGRF1基因在牛中的印记状态和调控机理,本研究首先利用qRT-PCR对RASGRF1基因在牛的6个组织(心脏,肝脏,脾脏,肺脏,肾脏,大脑)及胎盘中的表达进行分析,然后应用基于SNP的逆转录PCR(reverse transcription PCR,RT-PCR)产物直接测序法分析RASGRF1基因在牛的组织及胎盘的等位基因表达状态,最后采用亚硫酸盐直接测序法对RASGRF1基因启动子区域的甲基化状态进行研究.结果显示,RASGRF1基因在牛中呈现组织特异性表达,在心脏和肝脏中没有检测到表达;在脾脏、肺脏、肾脏和大脑中为单等位基因表达;在胎盘中为父源等位基因表达.在牛RASGRF1基因启动子及第1个外显子区域没有发现差异甲基化区(differential methylation region,DMRs),在被检测的组织(心脏,肝脏,脾脏,肺脏,肾脏,大脑)、胎盘和精子中均为轻甲基化,说明该区域的甲基化修饰不参与调控RASGRF1基因的印记表达,其印记表达可能由其他的表观遗传修饰调控.本研究可为深入研究RASGRF1基因的功能以及印记调控机制提供参考依据.
Genomic imprinting is a mammalian epigenetic phenomenon in which genes show parental-specific monoallelic expression.Imprinted genes play an important role in embryonic development and placental nutrition transport.The Ras protein specific guanine nucleotide releasing factor 1(RASGRF1)gene encodes 140 kD RAS specific guanine nucleotide releasing factor,and it is related to the growth and development traits of animals in infancy.Rasgrf1 gene is a paternal imprinted gene in mice(Mus musculus),but its imprinting status in cattle(Bos taurus)has not been studied.In order to study the imprinting status and regulatory mechanism of RASGRF1 gene in cattle,the expression of RASGRF1 gene in bovine 6 tissues(heart,liver,spleen,lung,kidney,brain)and placenta was analyzed by quantitative RT-PCR,and then the allele expression of RASGRF1 gene in bovine tissue and placenta was analyzed by direct sequencing of RT-PCR products based on SNP.Finally,the methylation status of the promoter region of RASGRF1 gene was studied by sulfite direct sequencing.The results showed that RASGRF1 gene showed tissue-specific expression in cattle,its transcript was not detected in heart and liver.RASGRF1 gene is monoallelically expressed in spleen,lung,kidney and brain,and paternally expressed in bovine placenta.There was no differential methylation region(DMRs)was found in the promoter and exon 1 region of bovine RASGRF1 gene.Hypomethylation was shown in heart,liver,spleen,lung,kidney,brain,placenta and sperm.These results indicated that DNA methylation in this region was not involved in the regulation of imprinting expression of RASGRF1 gene,the imprinting of bovine RASGRF1 gene might be regulated by other epigenetic modifications.This study provides a reference for the further study of the function and imprinting regulation mechanism of bovine RASGRF1gene.
张银蛟;陈玮娜;王思伟;李冬杰;杨利丹;郑云畅;张萃;王昆;李世杰
河北农业大学生命科学学院,保定 071001河北大学中医学院,保定 071000河北省农林科学院粮油作物研究所,石家庄 050018||河北省作物栽培生理与绿色生产重点实验室,石家庄 050018河北科技大学生物科学与工程学院,石家庄 050018
畜牧业
DNA甲基化基因组印记牛Ras蛋白特异性鸟苷酸释放因子1(RASGRF1)基因基因表达
DNA methylationGenomic imprintingBovineRas protein specific guanine nucleotide releasing factor 1(RASGRF1)geneGene expression
《农业生物技术学报》 2024 (010)
2265-2274 / 10
国家农业产业技术体系建设专项(CARS36);河北省自然科学基金(C2023204145;C2022201058);河北省农业产业技术体系创新团队项目(HBCT2024240206;HBCT2024240202);河北省科技计划项目(22326321D)
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