重庆市输入性卵形疟原虫curtisi和wallikeri亚种分子特征分析OA北大核心CSTPCD
Molecular characterization of Plasmodium ovale curtisi and Plasmodium ovale wallikeri imported cases in Chongqing
目的 为了解重庆市输入性卵形疟原虫curtisi和wallikeri亚种的分子特征,对卵形疟病例的卵形疟原虫Cox1、Cytb、Tra、Dhfr、K13基因位点多态性进行分析.方法 回顾性分析2013-2023年确诊的卵形疟原虫感染患者血样,PCR扩增卵形疟原虫Cox1、Cytb、Tra、Dhfr、K13基因的部分片段,利用测序技术及生物信息学方法区分2个亚种,分析卵形疟curtisi和wallikeri亚种核苷酸多态性位点以及氨基酸突变位点等多态性.结果 以ssrRNA区分26例卵形疟(curtisi亚种14例;wallikeri亚种12例)与Cox 1、Cytb、Tra基因分类结果一致.Cox1基因在145、153等13个位点呈现二态性,仅在528、862位点氨基酸M176I、I288V变异,单例N337H变异.Cytb基因亚种间发现12个位点发生碱基置换,仅248号氨基酸M2481突变.Tra基因发现49个核苷酸二态性位点,致18个氨基酸突变,curtisi型样本中poc1型比poc2型多PINTIN-PINTIN 和TITPIS氨基酸单元.Dhfr基因突变率较高,25%样本出现S58R突变.K13基因亚种内不呈单态,1例样本为杂合.结论 确认了重庆市输入性卵形疟在Cox1、Cytb、Tra、Dhfr、K13基因片段中curtisi和wallikeri亚种间的二态性位点、突变位点,丰富了输入性卵形疟原虫两个亚种基因多态性信息.
This study was aimed at understanding the molecular characteristics of Plasmodium ovale curtisi and Plasmodi-um ovale wallikeri imported cases in Chongqing,to provide data to support monitoring and control efforts.In a retrospective analysis,26 Plasmodium ovale archival blood samples were characterized with respect to five molecular markers(Cox1,Cytb,Tra,Dhfr,and K13)from 2013 to 2023.PCR amplification of partial fragments of the Cox1,Cytb,and Tra genes of Plas-modium ovale was performed to distinguish the two subspecies.The drug-resistance Dhfr and K13 genes of Plasmodium ovale were amplified with PCR assays followed by DNA sequencing,and the sequences were aligned.The differentiation of 26 cases of Plasmodium ovale(14 cases of curtisi subspecies and 12 cases of wallikeri subspecies)according to ssrRNA was consistent with the classification results of Cox1,Cytb,and TRA genes.Thirteen single nucleotide dimorphism sites were identified in Cox 1,including the 145 and 153 loci,with only variations in amino acids M176I and I288V at loci 528 and 862,and N337H mutation in one sample.Twelve base substitutions were found among Cytb gene subspecies,with only the M248I mutation in amino acid 248.A total of 49 nucleotide dimorphism sites in Tra gene,resulting in 18 amino acid mutations,were identified be-tween the two subspecies.In the curtisi type sample,the poc1 type had more PINTINPINTIN and TITPIS amino acid units than the poc2 type.The mutation rate of the Dhfr gene was rel-atively high:25%of the samples showed S58R mutations.The K13 gene subspecies was not homozygous,and one sample was heterozygous.This study confirmed the dimorphism and mutation sites between Plasmodium ovale curtisi and wallikeri sub-species in Cox1,Cytb,Tra,Dhfr,and K13 gene fragments of imported Plasmodium ovale in Chongqing,thus enriching knowledge regarding gene polymorphisms in Plasmodium ovale curtisi and wallikeri imported cases.
谭妍;罗飞;李志峰;向尧;许静茹;蔡娇娇;李迎丽
重庆医科大学公共卫生学院,重庆 400016||重庆市高致病性微生物重点实验室,重庆市疾病预防控制中心,重庆 400707重庆市高致病性微生物重点实验室,重庆市疾病预防控制中心,重庆 400707重庆医科大学公共卫生学院,重庆 400016
基础医学
输入性卵形疟curtisi亚种wallikeri亚种Cox1CytbTraDhfrK13
imported Plasmodium ovalecurtisi subspecieswallikeri subspeciesCox1CytbTraDhfrK13
《中国人兽共患病学报》 2024 (009)
814-822 / 9
国家卫健委寄生虫病原与媒介生物学重点实验室开放课题项目(No.NHCKFKT2022-09);重庆市自然科学基金项目(No.CSTB2022NSCQ-MSX0853) Supported by the Open Project of the Key Laboratory of Parasitic Pathogens and Vector Biology of the National Health Com-mission(No.NHCKFKT2022-09)and the Natural Science Foundation of Chongqing(No.CSTB2022NSCQ-MSX0853)
评论