圆圈病毒禽源1型实时荧光RAA快速检测方法的建立OA北大核心CSTPCD
Establishment of the real-time RAA detection method for Gyrovirus galga 1
为建立一种快速检测圆圈病毒禽源1型(GyVg1)的方法,查询比对GenBank中现有GyVg1基因组序列,基于序列保守区设计特异性引物和探针,经过筛选和优化,建立GyVg1重组酶介导核酸等温扩增(RAA)检测方法.结果显示,建立的实时荧光RAA方法可在20 min内鉴定GyVg1;该方法仅能检测出GyVg1,与圆圈病毒人源1型(GyH1)、鸡传染性贫血病毒(CIAV)、4型禽腺病毒(FAdV4)、H9亚型禽流感病毒(H9-AIV)、新城疫病毒(NDV)、禽传染性支气管炎病毒(IBV)、鸡传染性法氏囊炎病毒(IBDV)、鸡细小病毒(ChPV)、禽白血病毒(ALV)、鸡毒支原体(MG)、禽滑液囊支原体(MS)无交叉反应;检测下限可达1×102 copies/μL;批内和批间的变异系数均在6%以下.用建立的实时荧光RAA方法与荧光定量PCR方法同时对231份样品进行检测,两者检测结果相符.综上所述,本研究首次成功建立了 GyVg1实时荧光RAA方法,该方法特异性强、敏感性高、重复性好,为准确快速检测GyVg1提供了新的技术手段.
In order to establish a rapid detection method for Gyrovirus galga 1(GyVg1),the specific primers and probe were designed based on the conserved region of GyVg1 by searching and comparing se-quences currently available in GenBank.After screening primers and optimization of the reaction con-ditions,a recombinase acid amplication(RAA)detection method for GyVg1 was established.The results showed that GyVg1 could be identified in 20 minutes by the real-time fluorescence RAA assay.This method could only distinguish GyVg1,but not react with Gyrovirus homsa1(GyH1),chicken infectious anemia virus(CIAV),fowl adenovirus 4(FAdV4),H9 subtype avian influenza virus(H9-AIV),Newcastle disease virus(NDV),avian infectious bronchitis virus(IBV),infectious bursal disease virus(IBDV),chicken parvovirus(ChPV),avian leukosis virus(ALV),Mycoplasma gallisepticum(MG)and Mycoplasma synoviae(MS);The lowest limit of detection was 1 × 102 copies/μL and the coefficient of variations in intra-and inter-assay were both less than 6%.231 samples were tested simultaneously by fluorescence RAA and fluorescence quantitative PCR,and the results were consistent with each other.In conclusion,a re-al-time fluorescence RAA method is successfully established for the first time and this method has good specificity,sensitivity and repeatability,which provides a new technical means for the accurate and rapid detection of GyVg1 infection.
余丹;赵俊柯;喻华英;张艳芳;尹文巧;谢志勤;李小凤;吴嫒琼;谢芝勋
广西大学动物科学技术学院,广西南宁 530004||广西壮族自治区兽医研究所农业农村部中国(广西)-东盟跨境动物疫病防控重点实验室/广西兽医生物技术重点实验室,广西南宁 530001广西壮族自治区兽医研究所农业农村部中国(广西)-东盟跨境动物疫病防控重点实验室/广西兽医生物技术重点实验室,广西南宁 530001
畜牧业
圆圈病毒禽源1型重组酶介导核酸等温扩增核酸检测
Gyrovirus galga 1recombinase acid amplicationnucleic acid detection
《中国兽医科学》 2024 (012)
1577-1585 / 9
广西科技基地和人才专项(桂科AD17195083);广西兽医生物技术重点实验室自主研究项目(24-035-32-A-01);广西科技先锋队项目(202409-01);广西八桂学者专项(2019A50)
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